New Results
The evolutionary history of 2,658 cancers
View ORCID ProfileMoritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Thomas J. Mitchell, Yulia Rubanova, Pavana Anur, Daniel Rosebrock, Kaixan Yu, Maxime Tarabichi, Amit Deshwar, Jeff Wintersinger, Kortine Kleinheinz, Ignacio Vázquez-García, Kerstin Haase, Subhajit Sengupta, Geoff Macintyre, Salem Malikic, Nilgun Donmez, Dimitri G. Livitz, Marek Cmero, Jonas Demeulemeester, Steve Schumacher, Yu Fan, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Paul C. Boutros, David D. Bowtell, Hongtu Zhu, Gad Getz, Marcin Imielinski, Rameen Beroukhim, S. Cenk Sahinalp, Yuan Ji, Martin Peifer, View ORCID ProfileFlorian Markowetz, Ville Mustonen, Ke Yuan, Wenyi Wang, Quaid D. Morris, Paul T. Spellman, View ORCID ProfileDavid C. Wedge, View ORCID ProfilePeter Van Loo, on behalf of the PCAWG Evolution and Heterogeneity Working Group, the PCAWG network, Stefan C. Dentro, Ignaty Leshchiner, Moritz Gerstung, Clemency Jolly, Kerstin Haase, Jeff Wintersinger, Pavana Anur, Rameen Beroukhim, Paul C. Boutros, David D. Bowtell, Peter J. Campbell, Elizabeth L. Christie, Marek Cmero, Yupeng Cun, Kevin Dawson, Jonas Demeulemeester, Amit Deshwar, Nilgun Donmez, Roland Eils, Yu Fan, Matthew Fittall, Dale W. Garsed, Gad Getz, Santiago Gonzalez, Gavin Ha, Marcin Imielinski, Yuan Ji, Kortine Kleinheinz, Juhee Lee, Henry Lee-Six, Dimitri G. Livitz, Geoff Macintyre, Salem Malikic, Florian Markowetz, Inigo Martincorena, Thomas J. Mitchell, Ville Mustonen, Layla Oesper, Martin Peifer, Myron Peto, Benjamin J. Raphael, Daniel Rosebrock, Yulia Rubanova, S. Cenk Sahinalp, Salcedo Adriana, Matthias Schlesner, Steve Schumacher, Subhajit Sengupta, Lincoln D. Stein, Maxime Tarabichi, Ignacio Vázquez-García, Shankar Vembu, Wenyi Wang, David A. Wheeler, Tsun-Po Yang, Xiaotong Yao, Fouad Yousif, Kaixian Yu, Ke Yuan, Hongtu Zhu, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo
doi: https://doi.org/10.1101/161562
Moritz Gerstung
1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom;
2Wellcome Trust Sanger Institute, Cambridge, United Kingdom;
Clemency Jolly
3The Francis Crick Institute, London, United Kingdom;
Ignaty Leshchiner
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
Stefan C. Dentro
2Wellcome Trust Sanger Institute, Cambridge, United Kingdom;
3The Francis Crick Institute, London, United Kingdom;
5Big Data Institute, University of Oxford, Oxford, United Kingdom;
Santiago Gonzalez
1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom;
Thomas J. Mitchell
2Wellcome Trust Sanger Institute, Cambridge, United Kingdom;
6University of Cambridge, Cambridge, United Kingdom;
Yulia Rubanova
7University of Toronto, Toronto, Canada;
Pavana Anur
8Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR, USA;
Daniel Rosebrock
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
Kaixan Yu
9The University of Texas MD Anderson Cancer Center, Houston, TX, USA;
Maxime Tarabichi
3The Francis Crick Institute, London, United Kingdom;
Amit Deshwar
7University of Toronto, Toronto, Canada;
Jeff Wintersinger
7University of Toronto, Toronto, Canada;
Kortine Kleinheinz
10German Cancer Research Center (DKFZ), Heidelberg, Germany;
11Heidelberg University, Heidelberg, Germany;
Ignacio Vázquez-García
2Wellcome Trust Sanger Institute, Cambridge, United Kingdom;
6University of Cambridge, Cambridge, United Kingdom;
Kerstin Haase
3The Francis Crick Institute, London, United Kingdom;
Subhajit Sengupta
12NorthShore University HealthSystem, Evanston, IL, USA;
Geoff Macintyre
13Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom;
Salem Malikic
14Simon Fraser University, Vancouver, Canada;
Nilgun Donmez
14Simon Fraser University, Vancouver, Canada;
Dimitri G. Livitz
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
Marek Cmero
15University of Melbourne, Melbourne, Australia;
Jonas Demeulemeester
3The Francis Crick Institute, London, United Kingdom;
16Department of Human Genetics, University of Leuven, Leuven, Belgium;
Steve Schumacher
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
Yu Fan
9The University of Texas MD Anderson Cancer Center, Houston, TX, USA;
Xiaotong Yao
17Weill Cornell Medicine, New York, NY, USA;
18New York Genome Center, New York, NY, USA;
Juhee Lee
19University of California Santa Cruz, Santa Cruz, CA, USA;
Matthias Schlesner
10German Cancer Research Center (DKFZ), Heidelberg, Germany;
Paul C. Boutros
7University of Toronto, Toronto, Canada;
20Ontario Institute for Cancer Research, Toronto, Canada;
David D. Bowtell
21Peter MacCallum Cancer Centre, Melbourne, VIC 3052, Australia;
22Garvan Institute of Medical Research, Sydney, NSW 2010, Australia;
Hongtu Zhu
9The University of Texas MD Anderson Cancer Center, Houston, TX, USA;
Gad Getz
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
Marcin Imielinski
17Weill Cornell Medicine, New York, NY, USA;
18New York Genome Center, New York, NY, USA;
Rameen Beroukhim
4Broad Institute of MIT and Harvard, Cambridge, MA, USA;
S. Cenk Sahinalp
23Indiana University, Bloomington, IN, USA;
Yuan Ji
12NorthShore University HealthSystem, Evanston, IL, USA;
24The University of Chicago, Chicago, IL, USA;
Martin Peifer
25University of Cologne, Cologne, Germany;
Florian Markowetz
13Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom;
Ville Mustonen
26University of Helsinki, Helsinki, Finland;
Ke Yuan
13Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, United Kingdom;
27University of Glasgow, Glasgow G12 8RZ, United Kingdom.
Wenyi Wang
9The University of Texas MD Anderson Cancer Center, Houston, TX, USA;
Quaid D. Morris
7University of Toronto, Toronto, Canada;
Paul T. Spellman
8Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR, USA;
David C. Wedge
5Big Data Institute, University of Oxford, Oxford, United Kingdom;
Peter Van Loo
3The Francis Crick Institute, London, United Kingdom;
16Department of Human Genetics, University of Leuven, Leuven, Belgium;
26University of Helsinki, Helsinki, Finland;
1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom;
Stefan C. Dentro
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
3Big Data Institute, University of Oxford, Oxford OX3 7BN, United Kingdom;
Ignaty Leshchiner
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Moritz Gerstung
5European Bioinformatics Institute (EMBL-EBI), European Molecular Biology Laboratory, Cambridge CB10 1SD, United Kingdom;
Clemency Jolly
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
Kerstin Haase
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
Jeff Wintersinger
6University of Toronto, Toronto, ON M5S 3E1, Canada;
Pavana Anur
7Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR 97231, USA;
Rameen Beroukhim
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Paul C. Boutros
6University of Toronto, Toronto, ON M5S 3E1, Canada;
8Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada;
David D. Bowtell
9Peter MacCallum Cancer Centre, Melbourne, VIC 3052, Australia;
10Garvan Institute of Medical Research, Sydney, NSW 2010, Australia;
Peter J. Campbell
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
Elizabeth L. Christie
9Peter MacCallum Cancer Centre, Melbourne, VIC 3052, Australia;
Marek Cmero
11University of Melbourne, Melbourne, VIC 3010, Australia;
Yupeng Cun
12University of Cologne, 50931 Cologne, Germany;
Kevin Dawson
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
Jonas Demeulemeester
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
13Department of Human Genetics, University of Leuven, B-3000 Leuven, Belgium;
Amit Deshwar
6University of Toronto, Toronto, ON M5S 3E1, Canada;
Nilgun Donmez
14Simon Fraser University, Burnaby, BC V5A1S6, Canada;
Roland Eils
15German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany;
16Heidelberg University, 69120 Heidelberg, Germany;
Yu Fan
12University of Cologne, 50931 Cologne, Germany;
Matthew Fittall
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
Dale W. Garsed
9Peter MacCallum Cancer Centre, Melbourne, VIC 3052, Australia;
Gad Getz
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Santiago Gonzalez
5European Bioinformatics Institute (EMBL-EBI), European Molecular Biology Laboratory, Cambridge CB10 1SD, United Kingdom;
Gavin Ha
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Marcin Imielinski
18Weill Cornell Medicine, New York, NY 10065, USA;
19New York Genome Center, New York, NY 10013, USA;
Yuan Ji
20NorthShore University HealthSystem, Evanston, IL 60201, USA;
21The University of Chicago, Chicago, IL 60637, USA;
Kortine Kleinheinz
15German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany;
16Heidelberg University, 69120 Heidelberg, Germany;
Juhee Lee
22University of California Santa Cruz, Santa Cruz, CA 95064, USA;
Henry Lee-Six
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
Dimitri G. Livitz
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Geoff Macintyre
23Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 0RE, United Kingdom;
Salem Malikic
14Simon Fraser University, Burnaby, BC V5A1S6, Canada;
Florian Markowetz
23Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 0RE, United Kingdom;
Inigo Martincorena
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
Thomas J. Mitchell
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
24University of Cambridge, Cambridge CB2 0QQ, United Kingdom;
Ville Mustonen
25University of Helsinki, 00014 Helsinki, Finland;
Layla Oesper
26Carleton College, Northfield, MN 55057, USA;
Martin Peifer
12University of Cologne, 50931 Cologne, Germany;
Myron Peto
7Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR 97231, USA;
Benjamin J. Raphael
27Princeton University, Princeton, NJ 08540, USA;
Daniel Rosebrock
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Yulia Rubanova
6University of Toronto, Toronto, ON M5S 3E1, Canada;
S. Cenk Sahinalp
28Indiana University, Bloomington, IN 47405, USA;
Salcedo Adriana
8Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada;
Matthias Schlesner
15German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany;
Steve Schumacher
4Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA;
Subhajit Sengupta
20NorthShore University HealthSystem, Evanston, IL 60201, USA;
Lincoln D. Stein
8Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada;
Maxime Tarabichi
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
Ignacio Vázquez-García
2Wellcome Trust Sanger Institute, Cambridge CB10 1SA, United Kingdom;
24University of Cambridge, Cambridge CB2 0QQ, United Kingdom;
Shankar Vembu
6University of Toronto, Toronto, ON M5S 3E1, Canada;
Wenyi Wang
17The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA;
David A. Wheeler
29Baylor College of Medicine, Houston, TX 77030, USA;
Tsun-Po Yang
12University of Cologne, 50931 Cologne, Germany;
Xiaotong Yao
18Weill Cornell Medicine, New York, NY 10065, USA;
19New York Genome Center, New York, NY 10013, USA;
Fouad Yousif
8Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada;
Kaixian Yu
17The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA;
Ke Yuan
23Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge CB2 0RE, United Kingdom;
30University of Glasgow, Glasgow G12 8RZ, United Kingdom.
Hongtu Zhu
17The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA;
Quaid D. Morris
6University of Toronto, Toronto, ON M5S 3E1, Canada;
Paul T. Spellman
7Molecular and Medical Genetics, Oregon Health & Science University, Portland, OR 97231, USA;
David C. Wedge
3Big Data Institute, University of Oxford, Oxford OX3 7BN, United Kingdom;
Peter Van Loo
1The Francis Crick Institute, London NW1 1AT, United Kingdom;
13Department of Human Genetics, University of Leuven, B-3000 Leuven, Belgium;
Article usage
Posted July 11, 2017.
The evolutionary history of 2,658 cancers
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Thomas J. Mitchell, Yulia Rubanova, Pavana Anur, Daniel Rosebrock, Kaixan Yu, Maxime Tarabichi, Amit Deshwar, Jeff Wintersinger, Kortine Kleinheinz, Ignacio Vázquez-García, Kerstin Haase, Subhajit Sengupta, Geoff Macintyre, Salem Malikic, Nilgun Donmez, Dimitri G. Livitz, Marek Cmero, Jonas Demeulemeester, Steve Schumacher, Yu Fan, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Paul C. Boutros, David D. Bowtell, Hongtu Zhu, Gad Getz, Marcin Imielinski, Rameen Beroukhim, S. Cenk Sahinalp, Yuan Ji, Martin Peifer, Florian Markowetz, Ville Mustonen, Ke Yuan, Wenyi Wang, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo, on behalf of the PCAWG Evolution and Heterogeneity Working Group, the PCAWG network, Stefan C. Dentro, Ignaty Leshchiner, Moritz Gerstung, Clemency Jolly, Kerstin Haase, Jeff Wintersinger, Pavana Anur, Rameen Beroukhim, Paul C. Boutros, David D. Bowtell, Peter J. Campbell, Elizabeth L. Christie, Marek Cmero, Yupeng Cun, Kevin Dawson, Jonas Demeulemeester, Amit Deshwar, Nilgun Donmez, Roland Eils, Yu Fan, Matthew Fittall, Dale W. Garsed, Gad Getz, Santiago Gonzalez, Gavin Ha, Marcin Imielinski, Yuan Ji, Kortine Kleinheinz, Juhee Lee, Henry Lee-Six, Dimitri G. Livitz, Geoff Macintyre, Salem Malikic, Florian Markowetz, Inigo Martincorena, Thomas J. Mitchell, Ville Mustonen, Layla Oesper, Martin Peifer, Myron Peto, Benjamin J. Raphael, Daniel Rosebrock, Yulia Rubanova, S. Cenk Sahinalp, Salcedo Adriana, Matthias Schlesner, Steve Schumacher, Subhajit Sengupta, Lincoln D. Stein, Maxime Tarabichi, Ignacio Vázquez-García, Shankar Vembu, Wenyi Wang, David A. Wheeler, Tsun-Po Yang, Xiaotong Yao, Fouad Yousif, Kaixian Yu, Ke Yuan, Hongtu Zhu, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo
bioRxiv 161562; doi: https://doi.org/10.1101/161562
The evolutionary history of 2,658 cancers
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C. Dentro, Santiago Gonzalez, Thomas J. Mitchell, Yulia Rubanova, Pavana Anur, Daniel Rosebrock, Kaixan Yu, Maxime Tarabichi, Amit Deshwar, Jeff Wintersinger, Kortine Kleinheinz, Ignacio Vázquez-García, Kerstin Haase, Subhajit Sengupta, Geoff Macintyre, Salem Malikic, Nilgun Donmez, Dimitri G. Livitz, Marek Cmero, Jonas Demeulemeester, Steve Schumacher, Yu Fan, Xiaotong Yao, Juhee Lee, Matthias Schlesner, Paul C. Boutros, David D. Bowtell, Hongtu Zhu, Gad Getz, Marcin Imielinski, Rameen Beroukhim, S. Cenk Sahinalp, Yuan Ji, Martin Peifer, Florian Markowetz, Ville Mustonen, Ke Yuan, Wenyi Wang, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo, on behalf of the PCAWG Evolution and Heterogeneity Working Group, the PCAWG network, Stefan C. Dentro, Ignaty Leshchiner, Moritz Gerstung, Clemency Jolly, Kerstin Haase, Jeff Wintersinger, Pavana Anur, Rameen Beroukhim, Paul C. Boutros, David D. Bowtell, Peter J. Campbell, Elizabeth L. Christie, Marek Cmero, Yupeng Cun, Kevin Dawson, Jonas Demeulemeester, Amit Deshwar, Nilgun Donmez, Roland Eils, Yu Fan, Matthew Fittall, Dale W. Garsed, Gad Getz, Santiago Gonzalez, Gavin Ha, Marcin Imielinski, Yuan Ji, Kortine Kleinheinz, Juhee Lee, Henry Lee-Six, Dimitri G. Livitz, Geoff Macintyre, Salem Malikic, Florian Markowetz, Inigo Martincorena, Thomas J. Mitchell, Ville Mustonen, Layla Oesper, Martin Peifer, Myron Peto, Benjamin J. Raphael, Daniel Rosebrock, Yulia Rubanova, S. Cenk Sahinalp, Salcedo Adriana, Matthias Schlesner, Steve Schumacher, Subhajit Sengupta, Lincoln D. Stein, Maxime Tarabichi, Ignacio Vázquez-García, Shankar Vembu, Wenyi Wang, David A. Wheeler, Tsun-Po Yang, Xiaotong Yao, Fouad Yousif, Kaixian Yu, Ke Yuan, Hongtu Zhu, Quaid D. Morris, Paul T. Spellman, David C. Wedge, Peter Van Loo
bioRxiv 161562; doi: https://doi.org/10.1101/161562
Subject Area
Subject Areas
- Biochemistry (11752)
- Bioengineering (8752)
- Bioinformatics (29200)
- Biophysics (14974)
- Cancer Biology (12096)
- Cell Biology (17411)
- Clinical Trials (138)
- Developmental Biology (9421)
- Ecology (14182)
- Epidemiology (2067)
- Evolutionary Biology (18308)
- Genetics (12245)
- Genomics (16803)
- Immunology (11869)
- Microbiology (28097)
- Molecular Biology (11594)
- Neuroscience (60969)
- Paleontology (451)
- Pathology (1871)
- Pharmacology and Toxicology (3238)
- Physiology (4959)
- Plant Biology (10427)
- Synthetic Biology (2886)
- Systems Biology (7340)
- Zoology (1651)