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Large-Scale cognitive GWAS Meta-analysis Reveals Tissue-Specific Neural Expression and Potential Nootopic Drug Targets

Max Lam, Joey W. Trampush, Jin Yu, Emma Knowles, Gail Davies, David C. Liewald, John M. Starr, Srdjan Djurovic, Ingrid Melle, Kjetil Sundet, Andrea Christoforou, Ivar Reinvang, Pamela DeRosse, Astri J. Lundervold, Vidar M. Steen, Thomas Espeseth, Katri Raikkonen, Elisabeth Widen, Aarno Palotie, Johan G. Eriksson, Ina Giegling, Bettina Konte, Panos Roussos, Stella Giakoumaki, Katherine E. Burdick, Antony Payton, William Ollier, Ornit Chiba-Falek, Deborah K. Attix, Anna C. Need, Elizabeth T. Cirulli, Aristotle N. Voineskos, Nikos C. Stefanis, Dimitrios Avramopoulos, Alex Hatzimanolis, Dan E. Arking, Nikolaos Smyrnis, Robert M. Bilder, Nelson A. Freimer, Tyrone D. Cannon, Edythe London, Russell A. Poldrack, Fred W. Sabb, Eliza Congdon, Emily Drabant Conley, Matthew A. Scult, Dwight Dickinson, Richard E. Straub, Gary Donohoe, Derek Morris, Aiden Corvin, Michael Gill, Ahmad R. Hariri, Daniel R. Weinberger, Neil Pendleton, Panos Bitsios, Dan Rujescu, Jari Lahti, Stephanie Le Hellard, Matthew C. Keller, Ole A. Andreassen, Ian J. Deary, David C. Glahn, Anil K. Malhotra, Todd Lencz
doi: https://doi.org/10.1101/176842
Max Lam
Institute of Mental Health, Singapore;
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Joey W. Trampush
BrainWorkup, LLC, Los Angeles, CA;
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Jin Yu
Center for Psychiatric Neuroscience, Feinstein Institute for Medical Research, Manhasset, NY;
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Emma Knowles
Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA;
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Gail Davies
Ctr. for Cognitive Ageing & Cognitive Epidemiology, Dept. of Psychology, Univ. of Edinburgh;
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David C. Liewald
Ctr. for Cognitive Ageing & Cognitive Epidemiology, Dept. of Psychology, Univ. of Edinburgh;
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John M. Starr
Alzheimer Scotland Dementia Research Centre, University of Edinburgh, Edinburgh, UK;
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Srdjan Djurovic
Department of Medical Genetics, Oslo University Hospital, University of Bergen, Oslo, Norway;
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Ingrid Melle
NORMENT, K.G. Jebsen Centre for Psychosis Research, Univ. of Bergen, Bergen, Norway;
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Kjetil Sundet
Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway;
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Andrea Christoforou
NORMENT, K.G. Jebsen Centre for Psychosis Research, Univ. of Bergen, Bergen, Norway;
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Ivar Reinvang
Department of Psychology, University of Oslo, Oslo, Norway;
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Pamela DeRosse
Center for Psychiatric Neuroscience, Feinstein Institute for Medical Research, Manhasset, NY;
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Astri J. Lundervold
Haukeland University Hospital, Bergen, Norway;
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Vidar M. Steen
NORMENT, K.G. Jebsen Centre for Psychosis Research, Univ. of Bergen, Bergen, Norway;
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Thomas Espeseth
Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway;
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Katri Raikkonen
Institute of Behavioural Sciences, University of Helsinki, Helsinki, Finland;
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Elisabeth Widen
Institute for Molecular Medicine Finland (FIMM), University of Helsinki, Helsinki, Finland;
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Aarno Palotie
Institute for Molecular Medicine Finland (FIMM), University of Helsinki, Helsinki, Finland;
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Johan G. Eriksson
National Institute for Health and Welfare, Helsinki, Finland;
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Ina Giegling
Department of Psychiatry, Martin Luther University of Halle-Wittenberg, Halle, Germany;
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Bettina Konte
Department of Psychiatry, Martin Luther University of Halle-Wittenberg, Halle, Germany;
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Panos Roussos
Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA;
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Stella Giakoumaki
Department of Psychology, University of Crete, Greece;
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Katherine E. Burdick
Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA;
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Antony Payton
Manchester Ctr. for Audiology & Deafness, Manchester Academic Health Science Centre;
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William Ollier
Centre for Integrated Genomic Medical Research, Institute of Population Health;
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Ornit Chiba-Falek
Department of Neurology, Bryan Alzheimer's Disease Research Center;
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Deborah K. Attix
Department of Neurology, Bryan Alzheimer's Disease Research Center;
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Anna C. Need
Division of Brain Sciences, Department of Medicine, Imperial College, London, UK;
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Elizabeth T. Cirulli
Human Longevity Inc, Durham, NC, USA;
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Aristotle N. Voineskos
Campbell Family Mental Health Institute, Centre for Addiction and Mental Health;
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Nikos C. Stefanis
Department of Psychiatry, National and Kapodistrian University of Athens Medical School;
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Dimitrios Avramopoulos
Department of Psychiatry and McKusick-Nathans Institute of Genetic Medicine;
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Alex Hatzimanolis
Department of Psychiatry, National and Kapodistrian University of Athens Medical School;
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Dan E. Arking
Department of Psychiatry and McKusick-Nathans Institute of Genetic Medicine;
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Nikolaos Smyrnis
Department of Psychiatry, National and Kapodistrian University of Athens Medical School;
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Robert M. Bilder
UCLA Semel Institute for Neuroscience and Human Behavior, Los Angeles, CA, USA;
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Nelson A. Freimer
UCLA Semel Institute for Neuroscience and Human Behavior, Los Angeles, CA, USA;
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Tyrone D. Cannon
Department of Psychology, Yale University, New Haven, CT, USA;
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Edythe London
UCLA Semel Institute for Neuroscience and Human Behavior, Los Angeles, CA, USA;
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Russell A. Poldrack
Department of Psychology, Stanford University, Palo Alto, CA, USA;
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Fred W. Sabb
Robert and Beverly Lewis Center for Neuroimaging, University of Oregon, Eugene, OR, USA;
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Eliza Congdon
UCLA Semel Institute for Neuroscience and Human Behavior, Los Angeles, CA, USA;
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Emily Drabant Conley
23andMe, Inc., Mountain View, CA, USA;
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Matthew A. Scult
Laboratory of NeuroGenetics, Dept. of Psychology & Neuroscience, Duke University, Durham;
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Dwight Dickinson
Clinical and Translational Neuroscience Branch, Intramural Research Program, NIMH;
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Richard E. Straub
Lieber Inst. for Brain Development, Johns Hopkins Univ. Medical Campus, Baltimore, MD;
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Gary Donohoe
Department of Psychology, National University of Ireland, Galway, Ireland;
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Derek Morris
Neuropsychiatric Genetics Research Group, Department of Psychiatry;
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Aiden Corvin
Neuropsychiatric Genetics Research Group, Department of Psychiatry;
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Michael Gill
Neuropsychiatric Genetics Research Group, Department of Psychiatry;
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Ahmad R. Hariri
Laboratory of NeuroGenetics, Dept. of Psychology & Neuroscience, Duke University, Durham;
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Daniel R. Weinberger
Lieber Inst. for Brain Development, Johns Hopkins Univ. Medical Campus, Baltimore, MD;
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Neil Pendleton
Centre for Integrated Genomic Medical Research, Institute of Population Health;
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Panos Bitsios
Department of Psychiatry and Behavioral Sciences, Faculty of Medicine, University of Crete;
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Dan Rujescu
Department of Psychiatry, Martin Luther University of Halle-Wittenberg, Halle, Germany;
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Jari Lahti
Institute of Behavioural Sciences, University of Helsinki, Helsinki, Finland;
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Stephanie Le Hellard
K.G. Jebsen Centre for Psychosis Research & Norwegian Ctr. for Mental Disorders Research;
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Matthew C. Keller
Institute for Behavioral Genetics, University of Colorado, Boulder, Colorado;
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Ole A. Andreassen
Norwegian Ctr. for Mental Disorders Research, Inst. of Clinical Medicine, University of Bergen;
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Ian J. Deary
Centre for Cognitive Ageing and Cognitive Epidemiology, Department of Psychology;
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David C. Glahn
Department of Psychiatry, Yale University School of Medicine, New Haven, CT, USA;
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Anil K. Malhotra
Division of Psychiatry Research, Zucker Hillside Hospital, Glen Oaks, NY, USA
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Todd Lencz
Center for Psychiatric Neuroscience, Feinstein Institute for Medical Research, Manhasset, NY;
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Abstract

Neurocognitive ability is a fundamental readout of brain function, and cognitive deficits are a critical component of neuropsychiatric disorders, yet neurocognition is poorly understood at the molecular level. In the present report, we present the largest genome-wide association studies (GWAS) of cognitive ability to date (N=107,207), and further enhance signal by combining results with a large-scale GWAS of educational attainment. We identified 70 independent genomic loci associated with cognitive ability, 34 of which were novel. A total of 350 genes were implicated, and this list showed significant enrichment for genes associated with Mendelian disorders with an intellectual disability phenotype. Competitive pathway analysis of gene results implicated the biological process of neurogenesis, as well as the gene targets of two pharmacologic agents: cinnarizine, a T-type calcium channel blocker; and LY97241, a potassium channel inhibitor. Transcriptome-wide analysis revealed that the implicated genes were strongly expressed in neurons, but not astrocytes or oligodendrocytes, and were more strongly associated with fetal brain expression than adult brain expression. Several tissue-specific gene expression relationships to cognitive ability were observed (for example, DAG1 levels in the hippocampus). Finally, we report novel genetic correlations between cognitive ability and disparate phenotypes such as maternal age at first birth and number of children, as well as several autoimmune disorders.

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The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-ND 4.0 International license.
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  • Posted August 16, 2017.

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Large-Scale cognitive GWAS Meta-analysis Reveals Tissue-Specific Neural Expression and Potential Nootopic Drug Targets
Max Lam, Joey W. Trampush, Jin Yu, Emma Knowles, Gail Davies, David C. Liewald, John M. Starr, Srdjan Djurovic, Ingrid Melle, Kjetil Sundet, Andrea Christoforou, Ivar Reinvang, Pamela DeRosse, Astri J. Lundervold, Vidar M. Steen, Thomas Espeseth, Katri Raikkonen, Elisabeth Widen, Aarno Palotie, Johan G. Eriksson, Ina Giegling, Bettina Konte, Panos Roussos, Stella Giakoumaki, Katherine E. Burdick, Antony Payton, William Ollier, Ornit Chiba-Falek, Deborah K. Attix, Anna C. Need, Elizabeth T. Cirulli, Aristotle N. Voineskos, Nikos C. Stefanis, Dimitrios Avramopoulos, Alex Hatzimanolis, Dan E. Arking, Nikolaos Smyrnis, Robert M. Bilder, Nelson A. Freimer, Tyrone D. Cannon, Edythe London, Russell A. Poldrack, Fred W. Sabb, Eliza Congdon, Emily Drabant Conley, Matthew A. Scult, Dwight Dickinson, Richard E. Straub, Gary Donohoe, Derek Morris, Aiden Corvin, Michael Gill, Ahmad R. Hariri, Daniel R. Weinberger, Neil Pendleton, Panos Bitsios, Dan Rujescu, Jari Lahti, Stephanie Le Hellard, Matthew C. Keller, Ole A. Andreassen, Ian J. Deary, David C. Glahn, Anil K. Malhotra, Todd Lencz
bioRxiv 176842; doi: https://doi.org/10.1101/176842
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Large-Scale cognitive GWAS Meta-analysis Reveals Tissue-Specific Neural Expression and Potential Nootopic Drug Targets
Max Lam, Joey W. Trampush, Jin Yu, Emma Knowles, Gail Davies, David C. Liewald, John M. Starr, Srdjan Djurovic, Ingrid Melle, Kjetil Sundet, Andrea Christoforou, Ivar Reinvang, Pamela DeRosse, Astri J. Lundervold, Vidar M. Steen, Thomas Espeseth, Katri Raikkonen, Elisabeth Widen, Aarno Palotie, Johan G. Eriksson, Ina Giegling, Bettina Konte, Panos Roussos, Stella Giakoumaki, Katherine E. Burdick, Antony Payton, William Ollier, Ornit Chiba-Falek, Deborah K. Attix, Anna C. Need, Elizabeth T. Cirulli, Aristotle N. Voineskos, Nikos C. Stefanis, Dimitrios Avramopoulos, Alex Hatzimanolis, Dan E. Arking, Nikolaos Smyrnis, Robert M. Bilder, Nelson A. Freimer, Tyrone D. Cannon, Edythe London, Russell A. Poldrack, Fred W. Sabb, Eliza Congdon, Emily Drabant Conley, Matthew A. Scult, Dwight Dickinson, Richard E. Straub, Gary Donohoe, Derek Morris, Aiden Corvin, Michael Gill, Ahmad R. Hariri, Daniel R. Weinberger, Neil Pendleton, Panos Bitsios, Dan Rujescu, Jari Lahti, Stephanie Le Hellard, Matthew C. Keller, Ole A. Andreassen, Ian J. Deary, David C. Glahn, Anil K. Malhotra, Todd Lencz
bioRxiv 176842; doi: https://doi.org/10.1101/176842

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