RT Journal Article SR Electronic T1 A data acquisition and analysis pipeline for scanning angle interference microscopy JF bioRxiv FD Cold Spring Harbor Laboratory SP 050468 DO 10.1101/050468 A1 Catherine B. Carbone A1 Ronald D. Vale A1 Nico Stuurman YR 2016 UL http://biorxiv.org/content/early/2016/04/26/050468.abstract AB We describe open source software and hardware tools for calibrating, acquiring, and analyzing images for scanning angle interference microscopy (SAIM) analysis. These tools make it possible for any user with a TIRF microscope equipped with a motorized illumination unit to generate reconstructed images with nanometer precision in the axial (z) direction and diffraction-limited resolution in the lateral (xy) plane.