RT Journal Article
SR Electronic
T1 CogStack - Experiences of Deploying Integrated Information Retrieval and Extraction Services in a Large National Health Service Foundation Trust Hospital
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 123299
DO 10.1101/123299
A1 Richard Jackson
A1 Asha Agrawal
A1 Kenneth Lui
A1 Amos Folarin
A1 Honghan Wu
A1 Tudor Groza
A1 Angus Roberts
A1 Genevieve Gorrell
A1 Xingyi Song
A1 Damian Lewsley
A1 Doug Northwood
A1 Clive Stringer
A1 Robert Stewart
A1 Richard Dobson
YR 2017
UL http://biorxiv.org/content/early/2017/04/02/123299.abstract
AB Traditional health information systems are generally devised to support clinical data collection at the point of care. However, as the significance of the modern information economy expands in scope and permeates the healthcare domain, there is an increasing urgency for healthcare organisations to offer information systems that address the expectations of clinicians, researchers and the business intelligence community alike. Amongst other emergent requirements, the principal unmet need might be defined as the 3R principle (right data, right place, right time) to address deficiencies in organisational data flow while retaining the strict information governance policies that apply within the UK National Health Service (NHS). Here, we describe our work on deploying structured and unstructured data search and information extraction technologies within King’s College Hospital, the management of governance concerns and the associated use cases and cost saving opportunities that such components present.NHSNational Health ServiceEHRElectronic Health RecordHL7Health Level 7SQLStructured Query LanguageOLAPOnline Analytical ProcessingKCHKing’s College LondonNLPNatural Language ProcessingOCROptical Character RecognitionIEInformation ExtractionSLAMSouth London and MaudsleyNERNamed Entity RecognitionHPOHuman Phenotype OntologyJSONJavaScript Object NotationPHIProtected Health IdentifiersI2B2The Informatics for Integrating Biology and the BedsideJMSJava Messaging ServiceRESTRepresentational State TransferLDAPLightweight Directory Access ProtocolHTTPHypertext Transfer ProtocolSSLSecure Socket Layer100KGP100 000 Genomes ProjectCCPCyclic Citrullinated PeptideAPIApplication Programming InterfaceCRISClinical Records Interactive SearchSAILSecure Anonymised Data Link.