TY - JOUR T1 - CogStack - Experiences of Deploying Integrated Information Retrieval and Extraction Services in a Large National Health Service Foundation Trust Hospital JF - bioRxiv DO - 10.1101/123299 SP - 123299 AU - Richard Jackson AU - Asha Agrawal AU - Kenneth Lui AU - Amos Folarin AU - Honghan Wu AU - Tudor Groza AU - Angus Roberts AU - Genevieve Gorrell AU - Xingyi Song AU - Damian Lewsley AU - Doug Northwood AU - Clive Stringer AU - Robert Stewart AU - Richard Dobson Y1 - 2017/01/01 UR - http://biorxiv.org/content/early/2017/04/02/123299.abstract N2 - Traditional health information systems are generally devised to support clinical data collection at the point of care. However, as the significance of the modern information economy expands in scope and permeates the healthcare domain, there is an increasing urgency for healthcare organisations to offer information systems that address the expectations of clinicians, researchers and the business intelligence community alike. Amongst other emergent requirements, the principal unmet need might be defined as the 3R principle (right data, right place, right time) to address deficiencies in organisational data flow while retaining the strict information governance policies that apply within the UK National Health Service (NHS). Here, we describe our work on deploying structured and unstructured data search and information extraction technologies within King’s College Hospital, the management of governance concerns and the associated use cases and cost saving opportunities that such components present.NHSNational Health ServiceEHRElectronic Health RecordHL7Health Level 7SQLStructured Query LanguageOLAPOnline Analytical ProcessingKCHKing’s College LondonNLPNatural Language ProcessingOCROptical Character RecognitionIEInformation ExtractionSLAMSouth London and MaudsleyNERNamed Entity RecognitionHPOHuman Phenotype OntologyJSONJavaScript Object NotationPHIProtected Health IdentifiersI2B2The Informatics for Integrating Biology and the BedsideJMSJava Messaging ServiceRESTRepresentational State TransferLDAPLightweight Directory Access ProtocolHTTPHypertext Transfer ProtocolSSLSecure Socket Layer100KGP100 000 Genomes ProjectCCPCyclic Citrullinated PeptideAPIApplication Programming InterfaceCRISClinical Records Interactive SearchSAILSecure Anonymised Data Link. ER -