PT - JOURNAL ARTICLE AU - Moo K. Chung AU - Victoria Villalta-Gil AU - Hyekyoung Lee AU - Paul J. Rathouz AU - Benjamin B. Lahey AU - David H. Zald TI - Exact Topological Inference for Paired Brain Networks <em>via</em> Persistent Homology AID - 10.1101/140533 DP - 2017 Jan 01 TA - bioRxiv PG - 140533 4099 - http://biorxiv.org/content/early/2017/05/22/140533.short 4100 - http://biorxiv.org/content/early/2017/05/22/140533.full AB - We present a novel framework for characterizing paired brain networks using techniques in hyper-networks, sparse learning and persistent homology. The framework is general enough for dealing with any type of paired images such as twins, multimodal and longitudinal images. The exact nonparametric statistical inference procedure is derived on testing monotonic graph theory features that do not rely on time consuming permutation tests. The proposed method computes the exact probability in quadratic time while the permutation tests require exponential time. As illustrations, we apply the method to simulated networks and a twin fMRI study. In case of the latter, we determine the statistical significance of the heritability index of the large-scale reward network where every voxel is a network node.