RT Journal Article
SR Electronic
T1 VolcanoR - web service to produce volcano plots and do basic enrichment analysis
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 165100
DO 10.1101/165100
A1 Vladimir Naumov
A1 Ivan Balashov
A1 Vadim Lagutin
A1 Pavel Borovikov
A1 Alexey Alexeev
YR 2017
UL http://biorxiv.org/content/early/2017/07/18/165100.abstract
AB Summary: We introduce VolcanoR - web based tool to analyse results of differential gene expression. It takes a table containing gene name p-value and foldChange as input data. It can produce publication quality volcano plots, apply different p-value and fold change thresholds and do basic GeneOntology and KEGG enrichment analysis with selected gene set. For now it supports H.sapiens, R.norvegicus and M.musclus.Availability and Implementation: VolcanoR is wtitten using R Shiny framework. It is publically available at http://volcanor.bioinf.su or stand-alone application, that can be downloaded at https://github.com/vovalive/volcanoRContact: looongdog{at}gmail.com