RT Journal Article SR Electronic T1 Pan-embryo cell dynamics of germlayer formation in zebrafish JF bioRxiv FD Cold Spring Harbor Laboratory SP 173583 DO 10.1101/173583 A1 Gopi Shah A1 Konstantin Thierbach A1 Benjamin Schmid A1 Anna Reade A1 Ingo Roeder A1 Nico Scherf A1 Jan Huisken YR 2017 UL http://biorxiv.org/content/early/2017/08/08/173583.abstract AB Cell movements are coordinated across spatio-temporal scales to achieve precise positioning of organs during vertebrate gastrulation. In zebrafish, mechanisms governing such morphogenetic movements have so far only been studied within a local region or a single germlayer. Here, we present pan-embryo analyses of fate specification and dynamics of all three germlayers simultaneously within a gastrulating embryo, showing that cell movement characteristics are predominantly determined by its position within the embryo, independent of its germlayer identity. The spatially confined fate specification establishes a distinct distribution of cells in each germlayer during early gastrulation. The differences in the initial distribution are subsequently amplified by a unique global movement, which organizes the organ precursors along the embryonic body axis, giving rise to the blueprint of organ formation.