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Page 1
Automated design of thousands of nonrepetitive parts for engineering stable genetic systems.
Nat Biotechnol. 2020 Dec;38(12):1466-1475. doi: 10.1038/s41587-020-0584-2. Epub 2020 Jul 13.
Nat Biotechnol. 2020.
PMID: 32661437
Simultaneous repression of multiple bacterial genes using nonrepetitive extra-long sgRNA arrays.
Reis AC, Halper SM, Vezeau GE, Cetnar DP, Hossain A, Clauer PR, Salis HM.
Reis AC, et al. Among authors: cetnar dp.
Nat Biotechnol. 2019 Nov;37(11):1294-1301. doi: 10.1038/s41587-019-0286-9. Epub 2019 Oct 7.
Nat Biotechnol. 2019.
PMID: 31591552
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Systematic Quantification of Sequence and Structural Determinants Controlling mRNA stability in Bacterial Operons.
Cetnar DP, Salis HM.
Cetnar DP, et al.
ACS Synth Biol. 2021 Feb 19;10(2):318-332. doi: 10.1021/acssynbio.0c00471. Epub 2021 Jan 19.
ACS Synth Biol. 2021.
PMID: 33464822
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Surrogate model to screen for inactivation-based clearance of enveloped viruses during biotherapeutics process development.
Feroz H, Cetnar D, Hewlett R, Sharma S, Holstein M, Ghose S, Li ZJ.
Feroz H, et al. Among authors: cetnar d.
Biotechnol J. 2021 Dec;16(12):e2100176. doi: 10.1002/biot.202100176. Epub 2021 Oct 13.
Biotechnol J. 2021.
PMID: 34506679
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An Automated Pipeline for Engineering Many-Enzyme Pathways: Computational Sequence Design, Pathway Expression-Flux Mapping, and Scalable Pathway Optimization.
Halper SM, Cetnar DP, Salis HM.
Halper SM, et al. Among authors: cetnar dp.
Methods Mol Biol. 2018;1671:39-61. doi: 10.1007/978-1-4939-7295-1_4.
Methods Mol Biol. 2018.
PMID: 29170952
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Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences.
Espah Borujeni A, Cetnar D, Farasat I, Smith A, Lundgren N, Salis HM.
Espah Borujeni A, et al. Among authors: cetnar d.
Nucleic Acids Res. 2017 May 19;45(9):5437-5448. doi: 10.1093/nar/gkx061.
Nucleic Acids Res. 2017.
PMID: 28158713
Free PMC article.
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Thermodynamics of the Electron Acceptors in Heliobacterium modesticaldum: An Exemplar of an Early Homodimeric Type I Photosynthetic Reaction Center.
Ferlez B, Cowgill J, Dong W, Gisriel C, Lin S, Flores M, Walters K, Cetnar D, Redding KE, Golbeck JH.
Ferlez B, et al. Among authors: cetnar d.
Biochemistry. 2016 Apr 26;55(16):2358-70. doi: 10.1021/acs.biochem.5b01320. Epub 2016 Apr 14.
Biochemistry. 2016.
PMID: 27033441
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