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Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling.
Giraldez MD, Spengler RM, Etheridge A, Godoy PM, Barczak AJ, Srinivasan S, De Hoff PL, Tanriverdi K, Courtright A, Lu S, Khoory J, Rubio R, Baxter D, Driedonks TAP, Buermans HPJ, Nolte-'t Hoen ENM, Jiang H, Wang K, Ghiran I, Wang YE, Van Keuren-Jensen K, Freedman JE, Woodruff PG, Laurent LC, Erle DJ, Galas DJ, Tewari M. Giraldez MD, et al. Among authors: de hoff pl. Nat Biotechnol. 2018 Sep;36(8):746-757. doi: 10.1038/nbt.4183. Epub 2018 Jul 16. Nat Biotechnol. 2018. PMID: 30010675 Free PMC article.
Evolution of an expanded sex-determining locus in Volvox.
Ferris P, Olson BJ, De Hoff PL, Douglass S, Casero D, Prochnik S, Geng S, Rai R, Grimwood J, Schmutz J, Nishii I, Hamaji T, Nozaki H, Pellegrini M, Umen JG. Ferris P, et al. Among authors: de hoff pl. Science. 2010 Apr 16;328(5976):351-4. doi: 10.1126/science.1186222. Science. 2010. PMID: 20395508 Free PMC article.
Investigations of Rhizobium biofilm formation.
Fujishige NA, Kapadia NN, De Hoff PL, Hirsch AM. Fujishige NA, et al. Among authors: de hoff pl. FEMS Microbiol Ecol. 2006 May;56(2):195-206. doi: 10.1111/j.1574-6941.2005.00044.x. FEMS Microbiol Ecol. 2006. PMID: 16629750 Free article.
Rhizobium common nod genes are required for biofilm formation.
Fujishige NA, Lum MR, De Hoff PL, Whitelegge JP, Faull KF, Hirsch AM. Fujishige NA, et al. Among authors: de hoff pl. Mol Microbiol. 2008 Feb;67(3):504-15. doi: 10.1111/j.1365-2958.2007.06064.x. Epub 2007 Dec 14. Mol Microbiol. 2008. PMID: 18086203 Free article.
Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules.
Hirsch AM, Alvarado J, Bruce D, Chertkov O, De Hoff PL, Detter JC, Fujishige NA, Goodwin LA, Han J, Han S, Ivanova N, Land ML, Lum MR, Milani-Nejad N, Nolan M, Pati A, Pitluck S, Tran SS, Woyke T, Valdés M. Hirsch AM, et al. Among authors: de hoff pl. Genome Announc. 2013 Sep 26;1(5):e00759-13. doi: 10.1128/genomeA.00759-13. Genome Announc. 2013. PMID: 24072863 Free PMC article.