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2009 2
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Page 1
PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements.
Bilbao A, Munoz N, Kim J, Orton DJ, Gao Y, Poorey K, Pomraning KR, Weitz K, Burnet M, Nicora CD, Wilton R, Deng S, Dai Z, Oksen E, Gee A, Fasani RA, Tsalenko A, Tanjore D, Gardner J, Smith RD, Michener JK, Gladden JM, Baker ES, Petzold CJ, Kim YM, Apffel A, Magnuson JK, Burnum-Johnson KE. Bilbao A, et al. Among authors: fasani ra. Nat Commun. 2023 Apr 28;14(1):2461. doi: 10.1038/s41467-023-37031-9. Nat Commun. 2023. PMID: 37117207 Free PMC article.
Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity.
Pendse SN, Maertens A, Rosenberg M, Roy D, Fasani RA, Vantangoli MM, Madnick SJ, Boekelheide K, Fornace AJ, Odwin SA, Yager JD, Hartung T, Andersen ME, McMullen PD. Pendse SN, et al. Among authors: fasani ra. Arch Toxicol. 2017 Apr;91(4):1749-1762. doi: 10.1007/s00204-016-1824-6. Epub 2016 Sep 3. Arch Toxicol. 2017. PMID: 27592001 Free PMC article.
Phenotypes and tolerances in the design space of biochemical systems.
Savageau MA, Coelho PM, Fasani RA, Tolla DA, Salvador A. Savageau MA, et al. Among authors: fasani ra. Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6435-40. doi: 10.1073/pnas.0809869106. Epub 2009 Mar 11. Proc Natl Acad Sci U S A. 2009. PMID: 19279208 Free PMC article.