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ChIP-exo interrogation of Crp, DNA, and RNAP holoenzyme interactions.
Latif H, Federowicz S, Ebrahim A, Tarasova J, Szubin R, Utrilla J, Zengler K, Palsson BO. Latif H, et al. Among authors: federowicz s. PLoS One. 2018 May 17;13(5):e0197272. doi: 10.1371/journal.pone.0197272. eCollection 2018. PLoS One. 2018. PMID: 29771928 Free PMC article.
CyAnimator: Simple Animations of Cytoscape Networks.
Morris JH, Vijay D, Federowicz S, Pico AR, Ferrin TE. Morris JH, et al. Among authors: federowicz s. F1000Res. 2015 Aug 5;4:482. doi: 10.12688/f1000research.6852.2. eCollection 2015. F1000Res. 2015. PMID: 26937268 Free PMC article.
The PurR regulon in Escherichia coli K-12 MG1655.
Cho BK, Federowicz SA, Embree M, Park YS, Kim D, Palsson BØ. Cho BK, et al. Among authors: federowicz sa. Nucleic Acids Res. 2011 Aug;39(15):6456-64. doi: 10.1093/nar/gkr307. Epub 2011 May 13. Nucleic Acids Res. 2011. PMID: 21572102 Free PMC article.