Libbrecht MW[au] - Search Results

Year	Number of Results
2014	1
2015	2
2016	2
2018	3
2019	1
2021	2
2022	7
2023	1
2024	1

1

Obtaining genetics insights from deep learning via explainable artificial intelligence.

Novakovsky G, Dexter N, Libbrecht MW, Wasserman WW, Mostafavi S. Novakovsky G, et al. Among authors: libbrecht mw. Nat Rev Genet. 2023 Feb;24(2):125-137. doi: 10.1038/s41576-022-00532-2. Epub 2022 Oct 3. Nat Rev Genet. 2023. PMID: 36192604 Review.

2

Robust chromatin state annotation.

Foroozandeh Shahraki M, Farahbod M, Libbrecht MW. Foroozandeh Shahraki M, et al. Among authors: libbrecht mw. Genome Res. 2024 Apr 16. doi: 10.1101/gr.278343.123. Online ahead of print. Genome Res. 2024. PMID: 38514204 Free article.

3

Machine learning applications in genetics and genomics.

Libbrecht MW, Noble WS. Libbrecht MW, et al. Nat Rev Genet. 2015 Jun;16(6):321-32. doi: 10.1038/nrg3920. Epub 2015 May 7. Nat Rev Genet. 2015. PMID: 25948244 Free PMC article. Review.

4

SigTools: exploratory visualization for genomic signals.

Masoumi S, Libbrecht MW, Wiese KC. Masoumi S, et al. Among authors: libbrecht mw. Bioinformatics. 2022 Jan 27;38(4):1126-1128. doi: 10.1093/bioinformatics/btab742. Bioinformatics. 2022. PMID: 34718413

5

Segmentation and genome annotation algorithms for identifying chromatin state and other genomic patterns.

Libbrecht MW, Chan RCW, Hoffman MM. Libbrecht MW, et al. PLoS Comput Biol. 2021 Oct 14;17(10):e1009423. doi: 10.1371/journal.pcbi.1009423. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34648491 Free PMC article. Review.

6

Continuous chromatin state feature annotation of the human epigenome.

Daneshpajouh H, Chen B, Shokraneh N, Masoumi S, Wiese KC, Libbrecht MW. Daneshpajouh H, et al. Among authors: libbrecht mw. Bioinformatics. 2022 May 26;38(11):3029-3036. doi: 10.1093/bioinformatics/btac283. Bioinformatics. 2022. PMID: 35451453 Free PMC article.

7

Automated identification of maximal differential cell populations in flow cytometry data.

Yue A, Chauve C, Libbrecht MW, Brinkman RR. Yue A, et al. Among authors: libbrecht mw. Cytometry A. 2022 Feb;101(2):177-184. doi: 10.1002/cyto.a.24503. Epub 2021 Oct 22. Cytometry A. 2022. PMID: 34559446 Free PMC article.

8

Segway 2.0: Gaussian mixture models and minibatch training.

Chan RCW, Libbrecht MW, Roberts EG, Bilmes JA, Noble WS, Hoffman MM. Chan RCW, et al. Among authors: libbrecht mw. Bioinformatics. 2018 Feb 15;34(4):669-671. doi: 10.1093/bioinformatics/btx603. Bioinformatics. 2018. PMID: 29028889 Free PMC article.

9

Learning representations of chromatin contacts using a recurrent neural network identifies genomic drivers of conformation.

Dsouza KB, Maslova A, Al-Jibury E, Merkenschlager M, Bhargava VK, Libbrecht MW. Dsouza KB, et al. Among authors: libbrecht mw. Nat Commun. 2022 Jun 28;13(1):3704. doi: 10.1038/s41467-022-31337-w. Nat Commun. 2022. PMID: 35764630 Free PMC article.

10

PREDICTD PaRallel Epigenomics Data Imputation with Cloud-based Tensor Decomposition.

Durham TJ, Libbrecht MW, Howbert JJ, Bilmes J, Noble WS. Durham TJ, et al. Among authors: libbrecht mw. Nat Commun. 2018 Apr 11;9(1):1402. doi: 10.1038/s41467-018-03635-9. Nat Commun. 2018. PMID: 29643364 Free PMC article.

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