Biology and management of grape phylloxera

…, MA Walker, L Kocsis, AD Omer - Annual review of …, 2001 - annualreviews.org
… and radicicoles (AD Omer & J Granett, unpublished data; L Kocsis, unpublished data). …
gross reproductive rate of 50 eggs per female (AD Omer & J Granett, unpublished data) has been …

[PDF][PDF] A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

…, JT Robinson, AL Sanborn, I Machol, AD Omer… - Cell, 2014 - cell.com
We use in situ Hi-C to probe the 3D architecture of genomes, constructing haploid and diploid
maps of nine cell types. The densest, in human lymphoblastoid cells, contains 4.9 billion …

[PDF][PDF] Cohesin loss eliminates all loop domains

…, MS Shamim, J Shin, D Turner, Z Ye, AD Omer… - Cell, 2017 - cell.com
The human genome folds to create thousands of intervals, called "contact domains," that
exhibit enhanced contact frequency within themselves. "Loop domains" form because of …

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds

O Dudchenko, SS Batra, AD Omer, SK Nyquist… - Science, 2017 - science.org
The Zika outbreak, spread by the Aedes aegypti mosquito, highlights the need to create high-quality
assemblies of large genomes in a rapid and cost-effective way. Here we combine Hi-…

Genome sequence of Halobacterium species NRC-1

…, CJ Daniels, PP Dennis, AD Omer… - Proceedings of the …, 2000 - National Acad Sciences
We report the complete sequence of an extreme halophile, Halobacterium sp. NRC-1,
harboring a dynamic 2,571,010-bp genome containing 91 insertion sequences representing 12 …

[HTML][HTML] Improved reference genome of Aedes aegypti informs arbovirus vector control

…, SN Mitchell, J Muehling, MR Murphy, AD Omer… - Nature, 2018 - nature.com
Female Aedes aegypti mosquitoes infect more than 400 million people each year with
dangerous viral pathogens including dengue, yellow fever, Zika and chikungunya. Progress in …

Homologs of small nucleolar RNAs in Archaea

AD Omer, TM Lowe, AG Russell, H Ebhardt, SR Eddy… - Science, 2000 - science.org
In eukaryotes, dozens of posttranscriptional modifications are directed to specific nucleotides
in ribosomal RNAs (rRNAs) by small nucleolar RNAs (snoRNAs). We identified homologs …

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

…, H Teunissen, BG St Hilaire, D Weisz, AD Omer… - Science, 2021 - science.org
We investigated genome folding across the eukaryotic tree of life. We find two types of three-dimensional
(3D) genome architectures at the chromosome scale. Each type appears and …

RNA‐modifying machines in archaea

AD Omer, S Ziesche, WA Decatur… - Molecular …, 2003 - Wiley Online Library
… as a previously annotated aL7a ribosomal protein (AD Omer, unpubl. data; Ban et al., 2000;
… to demonstrate that all three proteins are present in the complex (AD Omer, unpubl. data). …

Structure of the bacterial ribosome at 2 Å resolution

ZL Watson, FR Ward, R Méheust, O Ad, A Schepartz… - elife, 2020 - elifesciences.org
Using cryo-electron microscopy (cryo-EM), we determined the structure of the Escherichia coli
70S ribosome with a global resolution of 2.0 Å. The maps reveal unambiguous positioning …