Soil protistology rebooted: 30 fundamental questions to start with

…, A Smirnov, D Bass, L Belbahri, C Berney… - Soil Biology and …, 2017 - Elsevier
Protists are the most diverse eukaryotes. These microbes are keystone organisms of soil
ecosystems and regulate essential processes of soil fertility such as nutrient cycling and plant …

Eukaryotic plankton diversity in the sunlit ocean

…, J Decelle, F Mahé, R Logares, E Lara, C Berney… - Science, 2015 - science.org
… (C) Global OTU abundance distribution and fit to the Preston log-normal model. Most OTUs
in our data set were represented by 3 to 16 reads, whereas fewer OTUs presented less or …

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy

…, D Bass, C Berney, L Bittner, C Boutte… - Nucleic acids …, 2012 - academic.oup.com
The interrogation of genetic markers in environmental meta-barcoding studies is currently
seriously hindered by the lack of taxonomically curated reference data sets for the targeted …

Revisions to the classification, nomenclature, and diversity of eukaryotes

…, A Smirnov, S Agatha, C Berney… - Journal of Eukaryotic …, 2019 - Wiley Online Library
This revision of the classification of eukaryotes follows that of Adl et al., 2012 [J. Euk. Microbiol.
59(5)] and retains an emphasis on protists. Changes since have improved the resolution …

[HTML][HTML] FRET or no FRET: a quantitative comparison

C Berney, G Danuser - Biophysical journal, 2003 - cell.com
Fluorescence resonance energy transfer (FRET) is a technique used to measure the
interaction between two molecules labeled with two different fluorophores (the donor and the …

UniEuk: Time to Speak a Common Language in Protistology!

C Berney, A Ciuprina, S Bender… - Journal of Eukaryotic …, 2017 - Wiley Online Library
… 1C): The EukBank module allows integration into the UniEuk system of the enormous
and largely nameless genetic information on eukaryotic diversity obtained from high-throughput …

[HTML][HTML] CBOL protist working group: barcoding eukaryotic richness beyond the animal, plant, and fungal kingdoms

…, S Audic, S Adl, D Bass, L Belbahri, C Berney… - PLoS …, 2012 - journals.plos.org
… (C) Currently used group-specific barcodes. The dashed line indicates the incertitude
concerning the position of the root in the tree of eukaryotic life. The unresolved relationships …

The bHLH protein PTF1-p48 is essential for the formation of the exocrine and the correct spatial organization of the endocrine pancreas

…, B Ledermann, K Bürki, C Berney… - Genes & …, 1998 - genesdev.cshlp.org
… p48 locus (b) and the mutated allele (c). Exons are shown as hatched boxes and intronic
or … are represented by the small arrows below the map of c. (B) Southern analysis of EcoRI-…

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

…, I Trautmann, S Romac, C Berney… - Nature ecology & …, 2017 - nature.com
… were: 95 C for 2 min; and 40 cycles of 95 C for 15 s, 57 C for 25 s, and 72 C for 40 s. Melt …
cycle 2 between 57 and 95 C with the temperature increasing at a rate of 0.5 C per 10 s. qPCR …

Stabling is associated with airway inflammation in young Arabian horses

…, V Gerber, A Jefcoat, C Berney… - Equine veterinary …, 2001 - Wiley Online Library
We examined the effect of stabling on upper and lower airway inflammation in 14 yearling
Arabian horses that had been at pasture since birth. Horses were divided into 2 groups of 7. …