User profiles for D. Osumi-Sutherland
David Osumi-SutherlandEuropean Bioinformatics Institute Verified email at ebi.ac.uk Cited by 9760 |
[HTML][HTML] Anatomical structures, cell types and biomarkers of the Human Reference Atlas
…, JC Gee, K Browne, D Osumi-Sutherland… - Nature cell …, 2021 - nature.com
The Human Reference Atlas (HRA) aims to map all of the cells of the human body to advance
biomedical research and clinical practice. This Perspective presents collaborative work by …
biomedical research and clinical practice. This Perspective presents collaborative work by …
[HTML][HTML] Cell type ontologies of the Human Cell Atlas
Massive single-cell profiling efforts have accelerated our discovery of the cellular
composition of the human body while at the same time raising the need to formalize this new …
composition of the human body while at the same time raising the need to formalize this new …
The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource
…, A McMahon, D Osumi-Sutherland… - Nucleic acids …, 2023 - academic.oup.com
… (B–D) Summary statistics sharing by publication year for (B) GWA studies (C) publications and
in the Catalog overall (D… (B–D) Summary statistics sharing by publication year for (B) GWA …
in the Catalog overall (D… (B–D) Summary statistics sharing by publication year for (B) GWA …
Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly
…, S Ngo, T Nielsen, CE O'Brien, D Osumi-Sutherland… - Science, 2022 - science.org
For more than 100 years, the fruit fly Drosophila melanogaster has been one of the most
studied model organisms. Here, we present a single-cell atlas of the adult fly, Tabula …
studied model organisms. Here, we present a single-cell atlas of the adult fly, Tabula …
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
…, JA McMurry, D Osumi-Sutherland… - Nucleic acids …, 2019 - academic.oup.com
The Human Phenotype Ontology (HPO)—a standardized vocabulary of phenotypic
abnormalities associated with 7000+ diseases—is used by thousands of researchers, clinicians, …
abnormalities associated with 7000+ diseases—is used by thousands of researchers, clinicians, …
FlyBase: enhancing Drosophila Gene Ontology annotations
…, G Millburn, D Osumi-Sutherland… - Nucleic acids …, 2009 - academic.oup.com
… Table 4 shows a summary of our current GO data for D. melanogaster. Although many of
the changes in GO annotation policy are quite recent, we can already see an improvement. …
the changes in GO annotation policy are quite recent, we can already see an improvement. …
[PDF][PDF] SynGO: an evidence-based, expert-curated knowledge base for the synapse
Synapses are fundamental information-processing units of the brain, and synaptic dysregulation
is central to many brain disorders ("synaptopathies"). However, systematic annotation of …
is central to many brain disorders ("synaptopathies"). However, systematic annotation of …
Cell type discovery using single-cell transcriptomics: implications for ontological representation
Cells are fundamental function units of multicellular organisms, with different cell types
playing distinct physiological roles in the body. The recent advent of single-cell transcriptional …
playing distinct physiological roles in the body. The recent advent of single-cell transcriptional …
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
Biological ontologies are used to organize, curate and interpret the vast quantities of data
arising from biological experiments. While this works well when using a single ontology, …
arising from biological experiments. While this works well when using a single ontology, …
[HTML][HTML] Finding our way through phenotypes
Despite a large and multifaceted effort to understand the vast landscape of phenotypic data,
their current form inhibits productive data analysis. The lack of a community-wide, consensus…
their current form inhibits productive data analysis. The lack of a community-wide, consensus…