User profiles for D. Swarbreck
David SwarbreckGroup Leader, Earlham Institute Verified email at earlham.ac.uk Cited by 20586 |
Shifting the limits in wheat research and breeding using a fully annotated reference genome
…, V Prade, H Šimková, T Wicker, D Swarbreck… - Science, 2018 - science.org
INTRODUCTION Wheat (Triticum aestivum L.) is the most widely cultivated crop on Earth,
contributing about a fifth of the total calories consumed by humans. Consequently, wheat …
contributing about a fifth of the total calories consumed by humans. Consequently, wheat …
A physical, genetic and functional sequence assembly of the barley genome.
…, D Marshall, M Bayer, D Swarbreck, D Sampath… - Nature, 2012 - iris.unito.it
Barley (Hordeum vulgare L.) is among the world's earliest domesticated and most important
crop plants. It is diploid with a large haploid genome of 5.1 gigabases (Gb). Here we present …
crop plants. It is diploid with a large haploid genome of 5.1 gigabases (Gb). Here we present …
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
P Lamesch, TZ Berardini, D Li, D Swarbreck… - Nucleic acids …, 2012 - academic.oup.com
The Arabidopsis Information Resource (TAIR, http://arabidopsis.org ) is a genome database
for Arabidopsis thaliana, an important reference organism for many fundamental aspects of …
for Arabidopsis thaliana, an important reference organism for many fundamental aspects of …
[HTML][HTML] Multiple wheat genomes reveal global variation in modern breeding
… A, B and D in these designations correspond to separate subgenomes derived from three
ancestral diploid species with similar but distinct genome structure and gene content that …
ancestral diploid species with similar but distinct genome structure and gene content that …
Efficient and accurate detection of splice junctions from RNA-seq with Portcullis
Next-generation sequencing technologies enable rapid and cheap genome-wide transcriptome
analysis, providing vital information about gene structure, transcript expression, and …
analysis, providing vital information about gene structure, transcript expression, and …
The Arabidopsis Information Resource (TAIR): gene structure and function annotation
D Swarbreck, C Wilks, P Lamesch… - Nucleic acids …, 2007 - academic.oup.com
The Arabidopsis Information Resource (TAIR, http://arabidopsis.org ) is the model organism
database for the fully sequenced and intensively studied model plant Arabidopsis thaliana . …
database for the fully sequenced and intensively studied model plant Arabidopsis thaliana . …
The DNA sequence and biological annotation of human chromosome 1
…, KF Barlow, KE McLay, R Kaul, D Swarbreck… - Nature, 2006 - nature.com
The reference sequence for each human chromosome provides the framework for understanding
genome function, variation and evolution. Here we report the finished sequence and …
genome function, variation and evolution. Here we report the finished sequence and …
[HTML][HTML] GENCODE: producing a reference annotation for ENCODE
… Panel D shows the GENCODE unprocessed pseudogene locus AC087380.14 at which
Ensembl predicts a coding gene. The arrow indicates a tiny intron introduced into the prediction …
Ensembl predicts a coding gene. The arrow indicates a tiny intron introduced into the prediction …
Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
…, D Heavens, M Alston, D Swarbreck… - The ISME …, 2013 - academic.oup.com
Plant–microbe interactions in the rhizosphere have important roles in biogeochemical cycling,
and maintenance of plant health and productivity, yet remain poorly understood. Using …
and maintenance of plant health and productivity, yet remain poorly understood. Using …
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …
Advances in genome sequencing and assembly technologies are generating many high-quality
genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …