User profiles for E. Eyras
Eduardo EyrasEMBL Australia Group Leader, Professor - Australian National University Verified email at anu.edu.au Cited by 42154 |
An overview of Ensembl
… We expect that over the coming years this comparative information will become increasingly
… further into both molecular biology research and clinical research over the coming years. …
… further into both molecular biology research and clinical research over the coming years. …
[HTML][HTML] EGASP: the human ENCODE genome annotation assessment project
Background We present the results of EGASP, a community experiment to assess the state-of-the-art
in genome annotation within the ENCODE regions, which span 1% of the human …
in genome annotation within the ENCODE regions, which span 1% of the human …
The ENCODE (ENCyclopedia of DNA elements) project
The ENCyclopedia Of DNA Elements (ENCODE) Project aims to identify all functional elements
in the human genome sequence. The pilot phase of the Project is focused on a specified …
in the human genome sequence. The pilot phase of the Project is focused on a specified …
The Ensembl genome database project
The Ensembl ( http://www.ensembl.org/ ) database project provides a bioinformatics
framework to organise biology around the sequences of large genomes. It is a comprehensive …
framework to organise biology around the sequences of large genomes. It is a comprehensive …
The genome sequence of taurine cattle: a window to ruminant biology and evolution
To understand the biology and evolution of ruminants, the cattle genome was sequenced to
about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a …
about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a …
The BioMart community portal: an innovative alternative to large, centralized data repositories
The BioMart Community Portal ( www.biomart.org ) is a community-driven effort to provide a
unified interface to biomedical databases that are distributed worldwide. The portal provides …
unified interface to biomedical databases that are distributed worldwide. The portal provides …
The role of alternative splicing in cancer
… Sebestyen E, Zawisza M, Eyras E. Detection of recurrent alternative splicing switches in tumor
samples reveals novel signatures of cancer. Nucleic Acids Res 2015; 43:1345-1356; PMID…
samples reveals novel signatures of cancer. Nucleic Acids Res 2015; 43:1345-1356; PMID…
[PDF][PDF] The functional impact of alternative splicing in cancer
… We also show the top 20 cases according to the number of MS samples for WES (E) and
WGS (F) data. For each gene and isoform (y axis), we show the number of patients for which we …
WGS (F) data. For each gene and isoform (y axis), we show the number of patients for which we …
The Ensembl automatic gene annotation system
… Recent years have seen the release of huge amounts of sequence data from genome … and
labor-intensive, taking large teams of annotators years to complete. As a result, the annotation …
labor-intensive, taking large teams of annotators years to complete. As a result, the annotation …
Control of alternative splicing through siRNA-mediated transcriptional gene silencing
… (e) An siRNA with a scrambled I33as sequence (SCR) has no effect on EDI alternative
splicing. (f) Dose-response of I33as (black) or siLuc control (white) on EDI alternative splicing. …
splicing. (f) Dose-response of I33as (black) or siLuc control (white) on EDI alternative splicing. …