… the fixed threshold are solved based on the E value of each putative gene and on the …
E values, the gene with the lowest E value is chosen.Otherwise, when they have the same E-value, …

Background Transcriptional regulation processes are the principal mechanisms of adaptation
in prokaryotes. In these processes, the regulatory proteins and the regulatory DNA signals …

Background Next Generation Sequencing and other high-throughput technologies have
brought a revolution to the bioinformatics landscape, by offering sheer amounts of data about …

New massive sequencing technologies are providing many bacterial genome sequences
from diverse taxa but a refined annotation of these genomes is crucial for obtaining scientific …

Background: Some studies have been conducted to assess the composition of the bacterial
communities inhabiting human milk, but they did not evaluate the presence of other …

Today’s biology involves many times the use of different omics approaches, in particular, data
and information from genomes and proteins are frequently difficult to integrate. In order to …

… We have annotated the European outbreak E. coli EHEC genome sequenced by BGI (6-2-…
found three putative hemolysins: Hemolysin E, a putative hemolysin expression modulating …

… To evaluate similarity for this first filtering of hits we use the Expect value (by default
evalue ≤ e −15 ) that describes the number of hits one can “expect” to see by chance when …

When visualizing scientific data one of the current bottlenecks is the lack of interactivity. There
already exist many options to build static data visualizations such as R, Matlab or Microsoft …

Evolution and clinical manifestations of Ebola virus (EBOV) infection overlap with the
pathologic processes that occur in sepsis 1 . Some viruses certainly compromise the immune …