User profiles for G. Duarte Ramos Matos

Guilherme Matos

Postdoctoral Associate, Stony Brook University
Verified email at stonybrook.edu
Cited by 326

Approaches for calculating solvation free energies and enthalpies demonstrated with an update of the FreeSolv database

G Duarte Ramos Matos, DY Kyu… - Journal of Chemical & …, 2017 - ACS Publications
Solvation free energies can now be calculated precisely from molecular simulations,
providing a valuable test of the energy functions underlying these simulations. Here we briefly …

Reproducibility of free energy calculations across different molecular simulation software packages

…, S Bosisio, G Duarte Ramos Matos… - Journal of chemical …, 2018 - ACS Publications
Alchemical free energy calculations are an increasingly important modern simulation
technique to calculate free energy changes on binding or solvation. Contemporary molecular …

Infinite dilution activity coefficients as constraints for force field parametrization and method development

G Duarte Ramos Matos, G Calabro… - Journal of chemical …, 2019 - ACS Publications
… Guilherme Duarte Ramos Matos Guilherme Duarte Ramos Matos … Guilherme Duarte
Ramos Matos - Department of Chemistry, University of California, Irvine, California 92697, United …

Descriptor-Driven de Novo Design Algorithms for DOCK6 Using RDKit

G Duarte Ramos Matos, S Pak… - Journal of Chemical …, 2023 - ACS Publications
Structure-based methods that employ principles of de novo design can be used to construct
small organic molecules from scratch using pre-existing fragment libraries to sample …

Qualidade de vida de pacientes internados em uma unidade de cuidados paliativos: um estudo transversal

GDR Matos, AC Pulschen - Revista brasileira de Cancerologia, 2015 - rbc.inca.gov.br
… Gustavo duarte ramos Matos e anelise carvalho Pulschen contribuíram na concepção e
planejamento do projeto de pesquisa; na obtenção e análise e interpretação dos dados; na …

[HTML][HTML] Second-line treatment of HER2-positive salivary gland tumor: ado-trastuzumab emtansine (T-DM1) after progression on trastuzumab

TS Corrêa, GDR Matos, M Segura… - Case reports in …, 2018 - karger.com
… Gustavo Duarte Ramos Matos; Gustavo Duarte Ramos Matos … Tatiana Strava Corrêa,
Gustavo Duarte Ramos Matos, Marcos Segura, Carlos Henrique dos Anjos; Second-Line …

[HTML][HTML] Challenges in the use of atomistic simulations to predict solubilities of drug-like molecules

GDR Matos, DL Mobley - F1000Research, 2018 - ncbi.nlm.nih.gov
Background: Solubility is a physical property of high importance to the pharmaceutical industry,
the prediction of which for potential drugs has so far been a hard task. We attempted to …

Molecular dynamics simulations of montmorillonite reinforcing amylose plasticized by Brazilian Cerrado oils: Polymer-clay nanocomposite

…, M Ghoul, L Chebil, GD Ramos Matos… - MRS …, 2018 - Springer
In this study, we performed computational simulations to extend the behavior knowledge
over molecular systems composed by amylose oligomers, three fatty acids often found in …

Design de novo dirigido por descritores quimioinformáticos em receptores de serotonina 5-HT2A 5-HT6 e 5-HT7: é possível gerar candidatos seletivos?

AG SOUSA, GDR MATOS - 2023 - proceedings.science
… SOUSA, Anelisa Granato de; MATOS, Guilherme Duarte Ramos. Design de novo dirigido
por descritores quimioinformáticos em receptores de serotonina 5-HT2A 5-HT6 e 5-HT7: é …

The high luminosity LHC interaction region magnets towards series production

…, G De Rijk, A Devred, DD Ramos… - Superconductor …, 2021 - iopscience.iop.org
The High Luminosity Large Hadron Collider (HL-LHC) is the new flagship project of CERN.
First endorsed in 2013 and approved in 2016, HL-LHC is an upgrade of the accelerator …