User profiles for G. Koutsovoulos
Georgios KoutsovoulosFORTH, Institute of Computer Science, The Biodiversity Computing Group Verified email at ics.forth.gr Cited by 3477 |
The evolution of parasitism in Nematoda
M Blaxter, G Koutsovoulos - Parasitology, 2015 - cambridge.org
Nematodes are abundant and diverse, and include many parasitic species. Molecular
phylogenetic analyses have shown that parasitism of plants and animals has arisen at least 15 …
phylogenetic analyses have shown that parasitism of plants and animals has arisen at least 15 …
[HTML][HTML] Blobology: exploring raw genome data for contaminants, symbionts and parasites using taxon-annotated GC-coverage plots
S Kumar, M Jones, G Koutsovoulos, M Clarke… - Frontiers in …, 2013 - frontiersin.org
… Lastly, different genomes can have very different proportions of G and C bases, and mixing
low GC genome data with balanced GC genome data may result in assemblies biased …
low GC genome data with balanced GC genome data may result in assemblies biased …
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini
G Koutsovoulos, S Kumar… - Proceedings of the …, 2016 - National Acad Sciences
… dujardini genome to have similar proportion of G + C bases (GC%), and to have the same
coverage in the raw data (because each segment is represented equally in every cell of the …
coverage in the raw data (because each segment is represented equally in every cell of the …
Toward 959 nematode genomes
… Filariasis” focused research project (SICA; contract number 242131); G. Koutsovoulos is
funded by a BBSRC School of Biological Sciences University of Edinburgh PhD studentship. …
funded by a BBSRC School of Biological Sciences University of Edinburgh PhD studentship. …
[HTML][HTML] The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
…, A Finkers-Tomczak, G Smant, G Koutsovoulos… - Genome biology, 2016 - Springer
… Here, we report a high quality draft genome of a Ro1 isolate of G. rostochiensis, in combination
with replicated transcriptome data from four key life stages, and genome sequence from …
with replicated transcriptome data from four key life stages, and genome sequence from …
[HTML][HTML] Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus
… model with Gamma distribution of rates model, GTR+G) and PhyloBayes (using a GTR plus
rate categories model, GTR-CAT+G). We also explored bipartition support from individual …
rate categories model, GTR-CAT+G). We also explored bipartition support from individual …
[PDF][PDF] Formin is associated with left-right asymmetry in the pond snail and the frog
…, JM Holden, HF Johnson, GD Koutsovoulos… - Current Biology, 2016 - cell.com
While components of the pathway that establishes left-right asymmetry have been identified
in diverse animals, from vertebrates to flies, it is striking that the genes involved in the first …
in diverse animals, from vertebrates to flies, it is striking that the genes involved in the first …
[HTML][HTML] The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets
C Godel, S Kumar, G Koutsovoulos, P Ludin… - The FASEB …, 2012 - ncbi.nlm.nih.gov
The heartworm Dirofilaria immitis is an important parasite of dogs. Transmitted by mosquitoes
in warmer climatic zones, it is spreading across southern Europe and the Americas at an …
in warmer climatic zones, it is spreading across southern Europe and the Americas at an …
[HTML][HTML] Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages
…, PM Schiffer, C Kraus, MJ Taylor, G Koutsovoulos… - PLoS …, 2015 - journals.plos.org
… RdRPs and those that initiate in a primer-dependent manner is the presence of an extra loop
in de novo polymerases, often containing aromatic residues, which enables the initiating G …
in de novo polymerases, often containing aromatic residues, which enables the initiating G …
Recent advances in population genomics of plant-parasitic nematodes
… GBS was successfully used to compare worldwide populations of G. rostochiensis and to …
Similarly, GBS was used to reveal the phylogenetic links between the new populations of G. …
Similarly, GBS was used to reveal the phylogenetic links between the new populations of G. …