User profiles for J. M. Zook
Justin ZookNational Institute of Standards and Technology Verified email at nist.gov Cited by 11202 |
Variant calling and benchmarking in an era of complete human genome sequences
Genetic variant calling from DNA sequencing has enabled understanding of germline
variation in hundreds of thousands of humans. Sequencing technologies and variant-calling …
variation in hundreds of thousands of humans. Sequencing technologies and variant-calling …
[HTML][HTML] Best practices for evaluating single nucleotide variant calling methods for microbial genomics
Innovations in sequencing technologies have allowed biologists to make incredible advances
in understanding biological systems. As experience grows, researchers increasingly …
in understanding biological systems. As experience grows, researchers increasingly …
The complete sequence of a human genome
Since its initial release in 2000, the human reference genome has covered only the
euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. …
euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. …
Somatosensory cortical map changes following digit amputation in adult monkeys
…, MS Cynader, A Schoppmann, JM Zook - Journal of …, 1984 - Wiley Online Library
The cortical representations of the hand in area 3b in adult owl monkeys were defined with
use of microelectrode mapping techniques 2–8 months after surgical amputation of digit 3, or …
use of microelectrode mapping techniques 2–8 months after surgical amputation of digit 3, or …
[HTML][HTML] A draft human pangenome reference
Here the Human Pangenome Reference Consortium presents a first draft of the human
pangenome reference. The pangenome contains 47 phased, diploid assemblies from a cohort of …
pangenome reference. The pangenome contains 47 phased, diploid assemblies from a cohort of …
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
The DNA sequencing technologies in use today produce either highly accurate short reads
or less-accurate long reads. We report the optimization of circular consensus sequencing (…
or less-accurate long reads. We report the optimization of circular consensus sequencing (…
Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls
JM Zook, B Chapman, J Wang, D Mittelman… - Nature …, 2014 - nature.com
Clinical adoption of human genome sequencing requires methods that output genotypes
with known accuracy at millions or billions of positions across a genome. Because of …
with known accuracy at millions or billions of positions across a genome. Because of …
Complete genomic and epigenetic maps of human centromeres
Existing human genome assemblies have almost entirely excluded repetitive sequences
within and near centromeres, limiting our understanding of their organization, evolution, and …
within and near centromeres, limiting our understanding of their organization, evolution, and …
Assuring the quality of next-generation sequencing in clinical laboratory practice
We direct your readers' attention to the principles and guidelines (Supplementary Guidelines)
developed by the Next-generation Sequencing: Standardization of Clinical Testing (Nex-…
developed by the Next-generation Sequencing: Standardization of Clinical Testing (Nex-…
[HTML][HTML] Extensive sequencing of seven human genomes to characterize benchmark reference materials
JM Zook, D Catoe, J McDaniel, L Vang, N Spies… - Scientific data, 2016 - nature.com
The Genome in a Bottle Consortium, hosted by the National Institute of Standards and
Technology (NIST) is creating reference materials and data for human genome sequencing, as …
Technology (NIST) is creating reference materials and data for human genome sequencing, as …