User profiles for J. S. Choudhary

Jyoti Choudhary

Functional Proteomics
Verified email at icr.ac.uk
Cited by 20742

GENCODE reference annotation for the human and mouse genomes

…, Y Zhang, B Aken, JS Choudhary… - Nucleic acids …, 2019 - academic.oup.com
The accurate identification and description of the genes in the human and mouse genomes
is a fundamental requirement for high quality analysis of data informing both genome biology …

Analysis of protein phosphorylation on a proteome‐scale

MO Collins, L Yu, JS Choudhary - Proteomics, 2007 - Wiley Online Library
Phosphorylation, the most intensively studied and common PTM on proteins, is a complex
biological phenomenon. Its complexity manifests itself in the large numbers of proteins that …

A polygenic burden of rare disruptive mutations in schizophrenia

…, MO Collins, NH Komiyama, JS Choudhary… - Nature, 2014 - nature.com
Schizophrenia is a common disease with a complex aetiology, probably involving multiple
and heterogeneous genetic factors. Here, by analysing the exome sequences of 2,536 …

Proteomic analysis of NMDA receptor–adhesion protein signaling complexes

H Husi, MA Ward, JS Choudhary, WP Blackstock… - Nature …, 2000 - nature.com
N-methyl-D-aspartate receptors (NMDAR) mediate long-lasting changes in synapse strength
via downstream signaling pathways. We report proteomic characterization with mass …

Mapping multiprotein complexes by affinity purification and mass spectrometry

MO Collins, JS Choudhary - Current Opinion in Biotechnology, 2008 - Elsevier
The combination of affinity purification and tandem mass spectrometry (MS) has emerged as
a powerful approach to delineate biological processes. In particular, the use of epitope tags …

GENCODE 2021

…, D Zerbino, Y Zhang, JS Choudhary… - Nucleic acids …, 2021 - academic.oup.com
The GENCODE project annotates human and mouse genes and transcripts supported by
experimental data with high accuracy, providing a foundational resource that supports genome …

OpenMS: a flexible open-source software platform for mass spectrometry data analysis

…, D Wojnar, WE Wolski, O Schilling, JS Choudhary… - Nature …, 2016 - nature.com
… In the meantime, to ensure continued support, we are displaying the site without styles
and JavaScript. … Jyoti S Choudhary … Jyoti S Choudhary

Characterization of the proteome, diseases and evolution of the human postsynaptic density

…, MDR Croning, IR Whittle, JS Choudhary… - Nature …, 2011 - nature.com
We isolated the postsynaptic density from human neocortex (hPSD) and identified 1,461
proteins. hPSD mutations cause 133 neurological and psychiatric diseases and were enriched …

Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome

…, WP Blackstock, JS Choudhary… - Journal of …, 2006 - Wiley Online Library
Abstract Characterization of the composition of the postsynaptic proteome (PSP) provides a
framework for understanding the overall organization and function of the synapse in normal …

[PDF][PDF] Proteogenomics of non-smoking lung cancer in East Asia delineates molecular signatures of pathogenesis and progression

…, WH Chang, TY Sung, JS Chen, SL Yu, JS Choudhary… - Cell, 2020 - cell.com
Lung cancer in East Asia is characterized by a high percentage of never-smokers, early
onset and predominant EGFR mutations. To illuminate the molecular phenotype of this …