MRI denoising using non-local means

JV Manjón, J Carbonell-Caballero, JJ Lull… - Medical image …, 2008 - Elsevier
Magnetic Resonance (MR) images are affected by random noise which limits the accuracy of
any quantitative measurements from the data. In the present work, a recently proposed filter …

[HTML][HTML] Genomics of the origin and evolution of Citrus

…, C Domingo, FR Tadeo, J Carbonell-Caballero… - Nature, 2018 - nature.com
The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide,
includes an uncertain number of species. Here we describe ten natural citrus species, using …

A Phylogenetic Analysis of 34 Chloroplast Genomes Elucidates the Relationships between Wild and Domestic Species within the Genus Citrus

J Carbonell-Caballero, R Alonso… - Molecular biology …, 2015 - academic.oup.com
Citrus genus includes some of the most important cultivated fruit trees worldwide. Despite
being extensively studied because of its commercial relevance, the origin of cultivated citrus …

[HTML][HTML] The effects of death and post-mortem cold ischemia on human tissue transcriptomes

…, D Pervouchine, J Carbonell-Caballero… - Nature …, 2018 - nature.com
Post-mortem tissues samples are a key resource for investigating patterns of gene expression.
However, the processes triggered by death and the post-mortem interval (PMI) can …

Babelomics 5.0: functional interpretation for new generations of genomic data

…, F Garcia-Garcia, J Carbonell-Caballero… - Nucleic acids …, 2015 - academic.oup.com
Babelomics has been running for more than one decade offering a user-friendly interface
for the functional analysis of gene expression and genomic data. Here we present its fifth …

Sequencing and functional analysis of the genome of a nematode egg-parasitic fungus, Pochonia chlamydosporia

…, J Carbonell-Caballero, A Conesa, J Dopazo… - Fungal Genetics and …, 2014 - Elsevier
Pochonia chlamydosporia is a worldwide-distributed soil fungus with a great capacity to infect
and destroy the eggs and kill females of plant-parasitic nematodes. Additionally, it has the …

[HTML][HTML] High throughput estimation of functional cell activities reveals disease mechanisms and predicts relevant clinical outcomes

…, F Salavert, J Carbonell-Caballero, J Dopazo - Oncotarget, 2017 - ncbi.nlm.nih.gov
Understanding the aspects of the cell functionality that account for disease or drug action
mechanisms is a main challenge for precision medicine. Here we propose a new method that …

Robust MRI brain tissue parameter estimation by multistage outlier rejection

…, G García‐Martí, J CarbonellCaballero… - … in Medicine: An …, 2008 - Wiley Online Library
This article addresses the problem of the tissue type parameter estimation in brain MRI in the
presence of partial volume effects. Automatic MRI brain tissue classification is hampered by …

Fibroblast activation and abnormal extracellular matrix remodelling as common hallmarks in three cancer‐prone genodermatoses

…, M Pévida, J CarbonellCaballero… - British Journal of …, 2019 - academic.oup.com
Background Recessive dystrophic epidermolysis bullosa (RDEB), Kindler syndrome (KS)
and xeroderma pigmentosum complementation group C (XPC) are three cancer‐prone …

[PDF][PDF] Arginine citrullination at the C-terminal domain controls RNA polymerase II transcription

…, J Quilez, J Carbonell-Caballero… - Molecular cell, 2019 - cell.com
The post-translational modification of key residues at the C-terminal domain of RNA polymerase
II (RNAP2-CTD) coordinates transcription, splicing, and RNA processing by modulating …