User profiles for J. Costello

James Costello

- Verified email at ucdenver.edu - Cited by 11566

John Costello

- Verified email at dcu.ie - Cited by 7388

John P Costello

- Verified email at nd.edu - Cited by 1074

[PDF][PDF] Next-generation machine learning for biological networks

DM Camacho, KM Collins, RK Powers, JC Costello… - Cell, 2018 - cell.com
Machine learning, a collection of data-analytical techniques aimed at building predictive
models from multi-dimensional datasets, is becoming integral to modern biological research. By …

Methylation matters

JF Costello, C Plass - Journal of medical genetics, 2001 - jmg.bmj.com
DNA methylation is not just for basic scientists any more. There is a growing awareness in the
medical field that having the correct pattern of genomic methylation is essential for healthy …

What is a luxury brand? A new definition and review of the literature

E Ko, JP Costello, CR Taylor - Journal of Business Research, 2019 - Elsevier
In spite of considerable prior research on luxury branding, no widely accepted definition of “luxury
brand” exists. The purpose of this paper is to review the literature in order to: a) …

[HTML][HTML] Integrative analysis of 111 reference human epigenomes

…, MQ Zhang, LH Chadwick, BE Bernstein, JF Costello… - Nature, 2015 - nature.com
The reference human genome sequence set the stage for studies of genetic variation and
its association with human disease, but epigenomic studies lack a similar reference. To …

[HTML][HTML] Evolution of genes and genomes on the Drosophila phylogeny

…, JM Comeron, JC Costello, JA Coyne, J Daub… - Nature, 2007 - hal.science
Comparative analysis of multiple genomes in a phylogenetic framework dramatically improves
the precision and sensitivity of evolutionary inference, producing more robust results than …

Operation of a free-electron laser from the extreme ultraviolet to the water window

…, A Cianchi, JT Costello, D Cubaynes, J Dardis… - Nature …, 2007 - nature.com
We report results on the performance of a free-electron laser operating at a wavelength of
13.7 nm where unprecedented peak and average powers for a coherent extreme-ultraviolet …

The clonal and mutational evolution spectrum of primary triple-negative breast cancers

…, M Sigaroudinia, P Gascard, T Tlsty, JF Costello… - Nature, 2012 - nature.com
Primary triple-negative breast cancers (TNBCs), a tumour type defined by lack of oestrogen
receptor, progesterone receptor and ERBB2 gene amplification, represent approximately 16…

Aberrant CpG-island methylation has non-random and tumour-type–specific patterns

JF Costello, MC Frühwald, DJ Smiraglia, LJ Rush… - Nature …, 2000 - nature.com
CpG islands frequently contain gene promoters or exons 1 and are usually unmethylated in
normal cells 1, 2, 3. Methylation of CpG islands is associated with delayed replication, …

The NIH roadmap epigenomics mapping consortium

…, JA Stamatoyannopoulos, JF Costello… - Nature …, 2010 - nature.com
The NIH Roadmap Epigenomics Mapping Consortium aims to produce a public resource of
epigenomic maps for stem cells and primary ex vivo tissues selected to represent the normal …

Wisdom of crowds for robust gene network inference

D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill… - Nature …, 2012 - nature.com
Reconstructing gene regulatory networks from high-throughput data is a long-standing
challenge. Through the Dialogue on Reverse Engineering Assessment and Methods (DREAM) …