User profiles for K. A. Boroevich

Keith A. Boroevich

RIKEN
Verified email at src.riken.jp
Cited by 6665

Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

A Fujimoto, Y Totoki, T Abe, KA Boroevich, F Hosoda… - Nature …, 2012 - nature.com
Hepatocellular carcinoma (HCC) is the third leading cause of cancer-related death
worldwide. We sequenced and analyzed the whole genomes of 27 HCCs, 25 of which were …

Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer

…, T Nakamura, H Aikata, K Arihiro, KA Boroevich… - Nature …, 2016 - nature.com
Liver cancer, which is most often associated with virus infection, is prevalent worldwide, and
its underlying etiology and genomic structure are heterogeneous. Here we provide a whole-…

[HTML][HTML] Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

…, SB Amin, P Bandopadhayay, J Bertl, KA Boroevich… - Nature, 2020 - nature.com
The discovery of drivers of cancer has traditionally focused on protein-coding genes 1 , 2 , 3
– 4 . Here we present analyses of driver point mutations and structural variants in non-…

[HTML][HTML] DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture

A Sharma, E Vans, D Shigemizu, KA Boroevich… - Scientific reports, 2019 - nature.com
It is critical, but difficult, to catch the small variation in genomic or other kinds of data that
differentiates phenotypes or categories. A plethora of data is available, but the information from …

[PDF][PDF] Functional genomics of the cilium, a sensory organelle

OE Blacque, EA Perens, KA Boroevich, PN Inglis, C Li… - Current Biology, 2005 - cell.com
Cilia and flagella play important roles in many physiological processes, including cell and
fluid movement, sensory perception, and development [1]. The biogenesis and maintenance …

Piecing together a ciliome

PN Inglis, KA Boroevich, MR Leroux - TRENDS in Genetics, 2006 - cell.com
Cilia are slender microtubule-based appendages that emanate from the surfaces of a large
proportion of eukaryotic cells. The motile and non-motile forms of cilia represent bona fide …

[HTML][HTML] Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity

…, D Shigemizu, T Abe, KA Boroevich… - Nature …, 2015 - nature.com
Intrahepatic cholangiocarcinoma and combined hepatocellular cholangiocarcinoma show
varying degrees of biliary epithelial differentiation, which can be defined as liver cancer …

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

…, N Hosono, K Nakano, T Abe, KA Boroevich… - Nature …, 2010 - nature.com
We report the analysis of a Japanese male using high-throughput sequencing to ×40 coverage.
More than 99% of the sequence reads were mapped to the reference human genome. …

Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors

…, A Sasaki-Oku, N Tokunaga, KA Boroevich… - Journal of …, 2017 - Elsevier
Background & Aims Patients with hepatocellular carcinoma (HCC) have a high-risk of multi-centric
(MC) tumor occurrence due to a strong carcinogenic background in the liver. In …

[HTML][HTML] Performance comparison of four commercial human whole-exome capture platforms

…, Y Momozawa, T Abe, T Morizono, KA Boroevich… - Scientific reports, 2015 - nature.com
Whole exome sequencing (WXS) is widely used to identify causative genetic mutations of
diseases. However, not only have several commercial human exome capture platforms been …