User profiles for K. Belkhir

khalid belkhir

université de montpellier, CNRS
Verified email at univ-montp2.fr
Cited by 10415

genclone: a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization

S Arnaud‐Haond, K Belkhir - Molecular Ecology Notes, 2007 - Wiley Online Library
genclone 1.0 is designed for studying clonality and its spatial components using genotype
data with molecular markers from haploid or diploid organisms. genclone 1.0 performs the …

Comparative population genomics in animals uncovers the determinants of genetic diversity

…, G Tsagkogeorga, AAT Weber, LA Weinert, K Belkhir… - Nature, 2014 - nature.com
… One of these potential confounding factors is the mutation rate: a higher average per-generation
mutation rate in r-strategists than in K-strategists could explain our results irrespective of …

[HTML][HTML] European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation

…, K Belkhir, S Klages, R Dieterich, K Stueber… - Nature …, 2014 - nature.com
The European sea bass (Dicentrarchus labrax) is a temperate-zone euryhaline teleost of
prime importance for aquaculture and fisheries. This species is subdivided into two naturally …

A Bayesian approach to the identification of panmictic populations and the assignment of individuals

KJ Dawson, K Belkhir - Genetics Research, 2001 - cambridge.org
We present likelihood-based methods for assigning the individuals in a sample to source
populations, on the basis of their genotypes at co-dominant marker loci. The source …

identix, a software to test for relatedness in a population using permutation methods

K Belkhir, V Castric, F Bonhomme - Molecular Ecology Notes, 2002 - Wiley Online Library
… identix input files are fully compatible with the package genetix (Belkhir et al . 2001), a
complete software package for population genetic data analyses running under Windows TM that …

Reference‐free transcriptome assembly in non‐model animals from next‐generation sequencing data

…, L Weinert, Y Chiari, K Belkhir… - Molecular ecology …, 2012 - Wiley Online Library
… varied k-mer length in Abyss, using k = 60 (our main analysis), 50, 40 or 30. Decreasing k-…
quite similar to the one we obtained with a single k-mer length of 60 bp, although the N50 was …

[HTML][HTML] Heterozygote deficiencies in small lacustrine populations of brook charr Salvelinus fontinalis Mitchill (Pisces, Salmonidae): a test of alternative hypotheses

V Castric, L Bernatchez, K Belkhir, F Bonhomme - Heredity, 2002 - nature.com
Empirical studies of natural populations have commonly reported departures from Hardy-Weinberg
expected proportions of heterozygote individuals. Recent advances in statistical …

Sponge digestive system diversity and evolution: filter feeding to carnivory

…, E Le Goff, C Martinand-Mari, K Belkhir… - Cell and tissue …, 2019 - Springer
Sponges are an ancient basal life form, so understanding their evolution is key to understanding
all metazoan evolution. Sponges have very unusual feeding mechanisms, with an …

[HTML][HTML] Reference-free population genomics from next-generation transcriptome data and the vertebrate–invertebrate gap

…, PC Alves, M Ballenghien, N Faivre, K Belkhir… - PLoS …, 2013 - journals.plos.org
In animals, the population genomic literature is dominated by two taxa, namely mammals
and drosophilids, in which fully sequenced, well-annotated genomes have been available for …

Bio++: efficient extensible libraries and tools for computational molecular evolution

…, L Dachary, N Galtier, K Belkhir… - Molecular biology …, 2013 - academic.oup.com
Efficient algorithms and programs for the analysis of the ever-growing amount of biological
sequence data are strongly needed in the genomics era. The pace at which new data and …