User profiles for L. D. Ubieta

Luis De la Torre-Ubieta

Assistant Professor, UCLA
Verified email at ucla.edu
Cited by 5727

Chromosome conformation elucidates regulatory relationships in developing human brain

H Won, L de La Torre-Ubieta, JL Stein, NN Parikshak… - Nature, 2016 - nature.com
… We overlapped gene coordinates from Gencode v.19 with LD regions as defined in the
original study 22 to find genes that reside in LD regions. The closest genes and LD genes were …

Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism

…, MJ Gandal, C Hartl, V Leppa, LT Ubieta… - Nature, 2016 - nature.com
… (LD) score regression to partition disease heritability within functional categories represented
by gene co-expression modules 41 . This method uses GWAS summary statistics and LD

[PDF][PDF] A single-cell transcriptomic atlas of human neocortical development during mid-gestation

D Polioudakis, L de la Torre-Ubieta, J Langerman… - Neuron, 2019 - cell.com
We performed RNA sequencing on 40,000 cells to create a high-resolution single-cell gene
expression atlas of developing human cortex, providing the first single-cell characterization …

[PDF][PDF] The dynamic landscape of open chromatin during human cortical neurogenesis

L de la Torre-Ubieta, JL Stein, H Won, CK Opland… - Cell, 2018 - cell.com
Non-coding regions comprise most of the human genome and harbor a significant fraction
of risk alleles for neuropsychiatric diseases, yet their functions remain poorly defined. We …

[PDF][PDF] Genetic control of expression and splicing in developing human brain informs disease mechanisms

…, C Hartl, N Mancuso, MJ Gandal, L De La Torre-Ubieta… - Cell, 2019 - cell.com
Tissue-specific regulatory regions harbor substantial genetic risk for disease. Because brain
development is a critical epoch for neuropsychiatric disease susceptibility, we characterized …

[PDF][PDF] Brain-trait-associated variants impact cell-type-specific gene regulation during neurogenesis

…, E Hadden-Ford, O Krupa, L de la Torre-Ubieta… - The American Journal of …, 2021 - cell.com
… the index e/sSNPs were in LD (r2 > 0.8 where LD was calculated in our sample population)
… found within LD buddies of cell-type-specific e/sQTLs at LD r2 > 0.8 (where LD is calculated …

Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation

…, GE Crawford, MI Love, L de la Torre-Ubieta… - Nature …, 2021 - nature.com
… We found that the most significant caSNP or an LD-proxy was located in annotated
functional regions for over 80% of caPeaks (Fig. 2c and Supplementary Table 3). These results …

Advancing the understanding of autism disease mechanisms through genetics

L de la Torre-Ubieta, H Won, JL Stein… - Nature medicine, 2016 - nature.com
Progress in understanding the genetic etiology of autism spectrum disorders (ASD) has fueled
remarkable advances in our understanding of its potential neurobiological mechanisms. …

MicroRNA-eQTLs in the developing human neocortex link miR-4707-3p expression to brain size

…, JM Wolter, DH Geschwind, L de la Torre-Ubieta… - Elife, 2023 - elifesciences.org
… to test for two causal variants linked by LD, failed to reject the null … The HEIDI test yielded
similar results when estimating LD with … MAF and LD for the variants were derived from the 212, …

A conserved PTEN/FOXO pathway regulates neuronal morphology during C. elegans development

R Christensen, L de la Torre-Ubieta, A Bonni… - …, 2011 - journals.biologists.com
The phosphatidylinositol 3-kinase (PI3K) signaling pathway is a conserved signal transduction
cascade that is fundamental for the correct development of the nervous system. The …