[PDF][PDF] A cancer cell program promotes T cell exclusion and resistance to checkpoint blockade
…, RW Jenkins, R Thummalapalli, MS Kowalczyk… - Cell, 2018 - cell.com
Immune checkpoint inhibitors (ICIs) produce durable responses in some melanoma patients,
but many patients derive no clinical benefit, and the molecular underpinnings of such …
but many patients derive no clinical benefit, and the molecular underpinnings of such …
Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial
…, L Li, PM Le, RL Allesøe, AR Richman, MS Kowalczyk… - Nature, 2019 - nature.com
Neoantigens, which are derived from tumour-specific protein-coding mutations, are exempt
from central tolerance, can generate robust immune responses 1 , 2 and can function as …
from central tolerance, can generate robust immune responses 1 , 2 and can function as …
Systematic comparison of single-cell and single-nucleus RNA-sequencing methods
J Ding, X Adiconis, SK Simmons, MS Kowalczyk… - Nature …, 2020 - nature.com
The scale and capabilities of single-cell RNA-sequencing methods have expanded rapidly
in recent years, enabling major discoveries and large-scale cell mapping efforts. However, …
in recent years, enabling major discoveries and large-scale cell mapping efforts. However, …
The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation
…, IM Chiu, BD Levy, MS Kowalczyk… - Nature, 2017 - nature.com
Type 2 innate lymphoid cells (ILC2s) both contribute to mucosal homeostasis and initiate
pathologic inflammation in allergic asthma. However, the signals that direct ILC2s to promote …
pathologic inflammation in allergic asthma. However, the signals that direct ILC2s to promote …
Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells
Both intrinsic cell state changes and variations in the composition of stem cell populations
have been implicated as contributors to aging. We used single-cell RNA-seq to dissect …
have been implicated as contributors to aging. We used single-cell RNA-seq to dissect …
[PDF][PDF] A cellular taxonomy of the bone marrow stroma in homeostasis and leukemia
N Baryawno, D Przybylski, MS Kowalczyk, Y Kfoury… - Cell, 2019 - cell.com
Stroma is a poorly defined non-parenchymal component of virtually every organ with key roles
in organ development, homeostasis, and repair. Studies of the bone marrow stroma have …
in organ development, homeostasis, and repair. Studies of the bone marrow stroma have …
Generation of mouse models of myeloid malignancy with combinatorial genetic lesions using CRISPR-Cas9 genome editing
D Heckl, MS Kowalczyk, D Yudovich, R Belizaire… - Nature …, 2014 - nature.com
Genome sequencing studies have shown that human malignancies often bear mutations in
four or more driver genes 1 , but it is difficult to recapitulate this degree of genetic complexity …
four or more driver genes 1 , but it is difficult to recapitulate this degree of genetic complexity …
Decoding human fetal liver haematopoiesis
…, B Innes, S Lindsay, MJT Stubbington, MS Kowalczyk… - Nature, 2019 - nature.com
Definitive haematopoiesis in the fetal liver supports self-renewal and differentiation of
haematopoietic stem cells and multipotent progenitors (HSC/MPPs) but remains poorly defined in …
haematopoietic stem cells and multipotent progenitors (HSC/MPPs) but remains poorly defined in …
[HTML][HTML] A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells
Reversing the dysfunctional T cell state that arises in cancer and chronic viral infections is
the focus of therapeutic interventions; however, current therapies are effective in only some …
the focus of therapeutic interventions; however, current therapies are effective in only some …
Induction and transcriptional regulation of the co-inhibitory gene module in T cells
The expression of co-inhibitory receptors, such as CTLA-4 and PD-1, on effector T cells is a
key mechanism for ensuring immune homeostasis. Dysregulated expression of co-inhibitory …
key mechanism for ensuring immune homeostasis. Dysregulated expression of co-inhibitory …