User profiles for M. Töpel

Mats Töpel

- Verified email at topel.se - Cited by 2243

Matthew Topel

- Verified email at emory.edu - Cited by 1475

[HTML][HTML] The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

…, M Töpel, T Tonon, K Vanneste, M Amirebrahimi… - Nature, 2016 - nature.com
Seagrasses colonized the sea 1 on at least three independent occasions to form the basis
of one of the most productive and widespread coastal ecosystems on the planet 2 . Here we …

[HTML][HTML] Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

M Ryberg, RH Nilsson, E Kristiansson, M Töpel… - BMC Evolutionary …, 2008 - Springer
Background The lack of reference sequences from well-identified mycorrhizal fungi often
poses a challenge to the inference of taxonomic affiliation of sequences from environmental …

[HTML][HTML] Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure

…, V Siewers, V Verendel, J Nielsen, M Töpel… - Nature …, 2020 - nature.com
Understanding the genetic regulatory code governing gene expression is an important
challenge in molecular biology. However, how individual coding and non-coding regions of the …

SpeciesGeoCoder: Fast categorization of species occurrences for analyses of biodiversity, biogeography, ecology, and evolution

M Töpel, A Zizka, MF Calió, R Scharn… - Systematic …, 2017 - academic.oup.com
… Mats Töpel and Alexander Zizka contributed equally to this article. … for fruitful discussions
and software testing; Paula Töpel for designing the SpeciesGeoCoder logo; Johan Viklund and …

Allele phasing greatly improves the phylogenetic utility of ultraconserved elements

…, AM Fernandes, U Olsson, M Töpel… - Systematic …, 2019 - academic.oup.com
Advances in high-throughput sequencing techniques now allow relatively easy and
affordable sequencing of large portions of the genome, even for nonmodel organisms. Many …

Ubiquitin-dependent chloroplast-associated protein degradation in plants

Q Ling, W Broad, R Trösch, M Töpel, T Demiral Sert… - Science, 2019 - science.org
… We thank M. Rashbrooke for assistance with initial analyses and rough mapping of sp2; Y. …
We thank M. Rashbrooke for assistance with initial analyses and rough mapping of sp2; Y. …

Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline

…, A Kremp, EC Ruck, C Sjöqvist, M Töpel… - The ISME …, 2022 - academic.oup.com
The salinity gradient separating marine and freshwater environments represents a major
ecological divide for microbiota, yet the mechanisms by which marine microbes have adapted …

[HTML][HTML] Friends With Benefits: Exploring the Phycosphere of the Marine Diatom Skeletonema marinoi

…, MIM Pinder, F Ohlsson, J Egardt, M Töpel… - Frontiers in …, 2019 - frontiersin.org
… Skeletonema marinoi strains ST54 and R05AC were maintained in f/2 + Si medium under
standard growth conditions (16C, 16 h photoperiod with an irradiance of 75 μmol photons m –…

Toc64/OEP64 is not essential for the efficient import of proteins into chloroplasts in Arabidopsis thaliana

…, P Boij, R Patel, A Wardle, M Töpel… - The Plant …, 2007 - Wiley Online Library
… (MS) agar medium in the presence or absence of 200 mm mannitol, as indicated. After 3 weeks
of … Therefore, we included mannitol to a final concentration of 200 mm in the agar growth …

Viscoelastic properties of human mesenchymally-derived stem cells and primary osteoblasts, chondrocytes, and adipocytes

EM Darling, M Topel, S Zauscher, TP Vail… - Journal of …, 2008 - Elsevier
The mechanical properties of single cells play important roles in regulating cell-matrix
interactions, potentially influencing the process of mechanotransduction. Recent studies also …