… In the 2013 on-site challenge, the winning algorithms were those by Tustison, Meier, and
Reza, with Tustison performing best in all three segmentation tasks (Fig. 6, bottom left). Overall, …

… *NJ Tustison is with the Department of Radiology, University of Pennsylvania, Philadelphia,
… [19] NJ Tustison and AA Amini, “Biventricular myocardial strains via nonrigid registration of …

The United States National Institutes of Health (NIH) commit significant support to open-source
data and software resources in order to foment reproducibility in the biomedical imaging …

Many studies of the human brain have explored the relationship between cortical thickness
and cognition, phenotype, or disease. Due to the subjectivity and time requirements in …

Publicly available scientific resources help establish evaluation standards, provide a platform
for teaching and improve reproducibility. Version 4 of the Insight ToolKit (ITK 4 ) seeks to …

Immune dysfunction is commonly associated with several neurological and mental disorders.
Although the mechanisms by which peripheral immunity may influence neuronal function …

We introduce Atropos, an ITK-based multivariate n-class open source segmentation algorithm
distributed with ANTs ( http://www.picsl.upenn.edu/ANTs ). The Bayesian formulation of …

… 2011a) variant based on B-spline regularization which has demonstrated good performance
in normal brain registration (Tustison and Avants 2013). We denote the mapping from the …

Diffeomorphic mappings are central to image registration due largely to their topological
properties and success in providing biologically plausible solutions to deformation and …

Accurate segmentation of different sub-regions of gliomas such as peritumoral edema,
necrotic core, enhancing, and non-enhancing tumor core from multimodal MRI scans has …