User profiles for N. Brandes
Nadav BrandesUCSF Verified email at ucsf.edu Cited by 1042 |
Thiol-based redox switches in eukaryotic proteins
N Brandes, S Schmitt, U Jakob - Antioxidants & redox signaling, 2009 - liebertpub.com
For many years, oxidative thiol modifications in cytosolic proteins were largely disregarded
as in vitro artifacts, and considered unlikely to play significant roles within the reducing …
as in vitro artifacts, and considered unlikely to play significant roles within the reducing …
[HTML][HTML] The language of proteins: NLP, machine learning & protein sequences
… In addition to counting individual tokens, BoW can also count multi-token combinations,
with overlap (k-mers) or without (n-grams). Since they are largely the same, we refer to n-grams …
with overlap (k-mers) or without (n-grams). Since they are largely the same, we refer to n-grams …
How is implementation research applied to advance health in low-income and middle-income countries?
… However, less than 5% of 791 Implementation Research (IR) studies reviewed for this
paper addressed objectives concerning issues such as scaling up (n=32) or sustainability (n=25). …
paper addressed objectives concerning issues such as scaling up (n=32) or sustainability (n=25). …
ProteinBERT: a universal deep-learning model of protein sequence and function
… A multi-head global attention layer is obtained by applying n heads independent single-…
outputs, obtaining an output of dimension n heads ⋅ d value (we used n heads = 4 across all 6 …
outputs, obtaining an output of dimension n heads ⋅ d value (we used n heads = 4 across all 6 …
[HTML][HTML] Genome-wide prediction of disease variant effects with a deep protein language model
Predicting the effects of coding variants is a major challenge. While recent deep-learning
models have improved variant effect prediction accuracy, they cannot analyze all coding …
models have improved variant effect prediction accuracy, they cannot analyze all coding …
Implementation research: new imperatives and opportunities in global health
Implementation research is important in global health because it addresses the challenges
of the know–do gap in real-world settings and the practicalities of achieving national and …
of the know–do gap in real-world settings and the practicalities of achieving national and …
[HTML][HTML] Factors associated with four or more antenatal care visits and its decline among pregnant women in Tanzania between 1999 and 2010
…, JA Callaghan-Koru, R Stevenson, N Brandes… - PloS one, 2014 - journals.plos.org
In Tanzania, the coverage of four or more antenatal care (ANC 4) visits among pregnant
women has declined over time. We conducted an exploratory analysis to identify factors …
women has declined over time. We conducted an exploratory analysis to identify factors …
[PDF][PDF] Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells
… (G) Quantification of partial chromosome loss at the Cas9 target site across all gRNAs
from ddPCR (n = 3, n = 2 biological donors). Numbers next to each point represent the TRAC-…
from ddPCR (n = 3, n = 2 biological donors). Numbers next to each point represent the TRAC-…
Adsorption-induced conformational changes of proteins onto ceramic particles: differential scanning calorimetry and FTIR analysis
N Brandes, PB Welzel, C Werner, LW Kroh - Journal of colloid and interface …, 2006 - Elsevier
Three model proteins, bovine serum albumin, hen's egg lysozyme and bovine serum fibrinogen,
were adsorbed from aqueous solution onto finely dispersed ceramic particles, namely …
were adsorbed from aqueous solution onto finely dispersed ceramic particles, namely …
[HTML][HTML] Retinoic acid signaling is essential for pancreas development and promotes endocrine at the expense of exocrine cell differentiation in Xenopus
Y Chen, FC Pan, N Brandes, S Afelik, M Sölter… - Developmental …, 2004 - Elsevier
How and when the vertebrate endoderm is first subdivided into discrete progenitor cell
populations that will give rise to the different major organs, including pancreas and liver, are only …
populations that will give rise to the different major organs, including pancreas and liver, are only …