… The portal will automatically limit the studies searched to match the query parameters so that
only data with mutation information is included for a mutation-only query and only data with …

… Research groups wishing to install local instances of the portal to analyze their own data
sets can do so by following the installation guide or use one of the prebuilt Amazon Machine …

We performed an extensive immunogenomic analysis of more than 10,000 tumors comprising
33 diverse cancer types by utilizing data compiled by TCGA. Across cancer types, we …

… Because the definition of DFI was not consistent with that of other outcomes (ie, cases
with a follow-up of less than 90 days were excluded, so were de novo stage IV cases), we …

Genetic alterations in signaling pathways that control cell-cycle progression, apoptosis, and
cell growth are common hallmarks of cancer, but the extent, mechanisms, and co-…

Identifying molecular cancer drivers is critical for precision oncology. Multiple advanced
algorithms to identify drivers now exist, but systematic attempts to combine and optimize them on …

We conducted comprehensive integrative molecular analyses of the complete set of tumors
in The Cancer Genome Atlas (TCGA), consisting of approximately 10,000 specimens and …

Our comprehensive analysis of alternative splicing across 32 The Cancer Genome Atlas
cancer types from 8,705 patients detects alternative splicing events and tumor variants by …

In the originally published version of this article, the authors neglected to include Younes
Mokrab and Aaron M. Newman as co-authors and misspelled the names of authors Charles S. …

… The PR curve for a given parameter configuration was constructed by taking the edge list
ranked from the most significant to the least, and then iterating over the edges so that we …