Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science
Within clinical, biomedical, and translational science, an increasing number of projects are
adopting graphs for knowledge representation. Graph‐based data models elucidate the …
adopting graphs for knowledge representation. Graph‐based data models elucidate the …
Principles and applications of static, thyristor-controlled shunt compensators
RA Otto, TH Putman, L Gyugyi - IEEE Transactions on Power …, 1978 - ieeexplore.ieee.org
… ib(t) at the instant of time when the derivative of vbc(t) is zero and vbc(t) is positive, or, in
practical terms, to sample the current ib(t) at the positive peak of voltage vbc(t). Evidently, the …
practical terms, to sample the current ib(t) at the positive peak of voltage vbc(t). Evidently, the …
Progress toward a universal biomedical data translator
…, A Pico, E Pollard, G Price, T Putman… - Clinical and …, 2022 - Wiley Online Library
Clinical, biomedical, and translational science has reached an inflection point in the breadth
and diversity of available data and the potential impact of such data to improve human …
and diversity of available data and the potential impact of such data to improve human …
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
…, ZM Pendlington, C Pilgrim, T Putman… - Nucleic acids …, 2020 - academic.oup.com
… outcomes with genetic variation and environmental factors remains a challenge: patient
phenotypes may not match known diseases, candidate variants may be in genes that haven’t …
phenotypes may not match known diseases, candidate variants may be in genes that haven’t …
Wikidata as a knowledge graph for the life sciences
Wikidata is a community-maintained knowledge base that has been assembled from repositories
in the fields of genomics, proteomics, genetic variants, pathways, chemical compounds…
in the fields of genomics, proteomics, genetic variants, pathways, chemical compounds…
[HTML][HTML] High-performance web services for querying gene and variant annotation
… 111959693G>T — more examples are given in Additional file 2: Table S3). Although the
primary keys of … 274G>T) are also stored in each variant object and are indexed for queries. …
primary keys of … 274G>T) are also stored in each variant object and are indexed for queries. …
[HTML][HTML] A simple standard for sharing ontological mappings (SSSOM)
…, JA Overton, B Peters, T Putman… - Database, 2022 - academic.oup.com
Despite progress in the development of standards for describing and exchanging scientific
information, the lack of easy-to-use standards for mapping between different representations …
information, the lack of easy-to-use standards for mapping between different representations …
Measurement of skeletal muscle radiation attenuation and basis of its biological variation
…, FA Buteau, J Frenette, CT Putman… - Acta …, 2014 - Wiley Online Library
Skeletal muscle contains intramyocellular lipid droplets within the cytoplasm of myocytes as
well as intermuscular adipocytes. These depots exhibit physiological and pathological …
well as intermuscular adipocytes. These depots exhibit physiological and pathological …
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species
TE Putman, K Schaper, N Matentzoglu… - Nucleic acids …, 2024 - academic.oup.com
Bridging the gap between genetic variations, environmental determinants, and phenotypic
outcomes is critical for supporting clinical diagnosis and understanding mechanisms of …
outcomes is critical for supporting clinical diagnosis and understanding mechanisms of …
Wikidata as a semantic framework for the Gene Wiki initiative
…, A Waagmeester, E Mitraka, J Turner, T Putman… - Database, 2016 - academic.oup.com
Open biological data are distributed over many resources making them challenging to integrate,
to update and to disseminate quickly. Wikidata is a growing, open community database …
to update and to disseminate quickly. Wikidata is a growing, open community database …