Toward precision medicine in glioblastoma: the promise and the challenges

…, SM Chang, TC Ryken, WD Tembe… - Neuro …, 2015 - academic.oup.com
Integrated sequencing strategies have provided a broader understanding of the genomic
landscape and molecular classifications of multiple cancer types and have identified various …

[HTML][HTML] Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays

…, S Szelinger, M Redman, D Duggan, W Tembe… - PLoS …, 2008 - journals.plos.org
We use high-density single nucleotide polymorphism (SNP) genotyping microarrays to
demonstrate the ability to accurately and robustly determine whether individuals are in a complex …

[HTML][HTML] Germline Mutations in HOXB13 and Prostate-Cancer Risk

…, KA Zuhlke, CM Robbins, WD Tembe… - … England Journal of …, 2012 - Mass Medical Soc
Background Family history is a significant risk factor for prostate cancer, although the
molecular basis for this association is poorly understood. Linkage studies have implicated …

Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides

JB Egan, CX Shi, W Tembe… - Blood, The Journal …, 2012 - ashpublications.org
The longitudinal evolution of a myeloma genome from diagnosis to plasma cell leukemia
has not previously been reported. We used whole-genome sequencing (WGS) on 4 purified …

Performance of feature-selection methods in the classification of high-dimension data

J Hua, WD Tembe, ER Dougherty - Pattern Recognition, 2009 - Elsevier
Contemporary biological technologies produce extremely high-dimensional data sets from
which to design classifiers, with 20,000 or more potential features being common place. In …

[HTML][HTML] Profiles of extracellular miRNA in cerebrospinal fluid and serum from patients with Alzheimer's and Parkinson's diseases correlate with disease status and …

…, H Shill, C Adler, M Sabbagh, S Villa, W Tembe… - PloS one, 2014 - journals.plos.org
The discovery and reliable detection of markers for neurodegenerative diseases have been
complicated by the inaccessibility of the diseased tissue- such as the inability to biopsy or …

GRM7 variants confer susceptibility to age-related hearing impairment

…, JJ Corneveaux, WD Tembe… - Human molecular …, 2009 - academic.oup.com
Age-related hearing impairment (ARHI), or presbycusis, is the most prevalent sensory
impairment in the elderly. ARHI is a complex disease caused by an interaction between …

Identification of extracellular miRNA in human cerebrospinal fluid by next-generation sequencing

…, L Ghaffari, S Rhodes, A Courtright, W Tembe… - Rna, 2013 - rnajournal.cshlp.org
There has been a growing interest in using next-generation sequencing (NGS) to profile
extracellular small RNAs from the blood and cerebrospinal fluid (CSF) of patients with …

Copy number and targeted mutational analysis reveals novel somatic events in metastatic prostate tumors

CM Robbins, WA Tembe, A Baker, S Sinari… - Genome …, 2011 - genome.cshlp.org
Advanced prostate cancer can progress to systemic metastatic tumors, which are generally
androgen insensitive and ultimately lethal. Here, we report a comprehensive genomic survey …

[HTML][HTML] Integrated genomic and epigenomic analysis of breast cancer brain metastasis

…, S Jung, S Nasser, G Wallstrom, W Tembe… - PloS one, 2014 - journals.plos.org
The brain is a common site of metastatic disease in patients with breast cancer, which has
few therapeutic options and dismal outcomes. The purpose of our study was to identify …