User profiles for Z. J. Gartner
Zev J GartnerProfessor of Pharmaceutical Chemistry, University of California San Francisco Verified email at ucsf.edu Cited by 9497 |
[PDF][PDF] DoubletFinder: doublet detection in single-cell RNA sequencing data using artificial nearest neighbors
Single-cell RNA sequencing (scRNA-seq) data are commonly affected by technical artifacts
known as "doublets," which limit cell throughput and lead to spurious biological conclusions. …
known as "doublets," which limit cell throughput and lead to spurious biological conclusions. …
Directing the assembly of spatially organized multicomponent tissues from the bottom up
JS Liu, ZJ Gartner - Trends in cell biology, 2012 - cell.com
The complexity of the human body derives from numerous modular building blocks
assembled hierarchically across multiple length scales. These building blocks, spanning sizes …
assembled hierarchically across multiple length scales. These building blocks, spanning sizes …
DNA-templated organic synthesis and selection of a library of macrocycles
ZJ Gartner, BN Tse, R Grubina, JB Doyon, TM Snyder… - Science, 2004 - science.org
The translation of nucleic acid libraries into corresponding synthetic compounds would
enable selection and amplification principles to be applied to man-made molecules. We used …
enable selection and amplification principles to be applied to man-made molecules. We used …
Dissecting the stem cell niche with organoid models: an engineering-based approach
For many tissues, single resident stem cells grown in vitro under appropriate three-dimensional
conditions can produce outgrowths known as organoids. These tissues recapitulate …
conditions can produce outgrowths known as organoids. These tissues recapitulate …
MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices
Sample multiplexing facilitates scRNA-seq by reducing costs and identifying artifacts such as
cell doublets. However, universal and scalable sample barcoding strategies have not been …
cell doublets. However, universal and scalable sample barcoding strategies have not been …
[PDF][PDF] Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution
Tumor evolution is driven by the progressive acquisition of genetic and epigenetic alterations
that enable uncontrolled growth and expansion to neighboring and distal tissues. The …
that enable uncontrolled growth and expansion to neighboring and distal tissues. The …
Opportunities for organoids as new models of aging
… ZJ Gartner is a Chan Zuckerberg Biohub investigator and is supported by an Era of Hope
Scholar Award (BC123047), the Center for Cellular Construction (NSF DBI-1548297), and the …
Scholar Award (BC123047), the Center for Cellular Construction (NSF DBI-1548297), and the …
The generality of DNA-templated synthesis as a basis for evolving non-natural small molecules
ZJ Gartner, DR Liu - Journal of the American Chemical Society, 2001 - ACS Publications
Despite their limited chemical functionality, proteins and nucleic acids dominate the solutions
to many complex chemical problems because they can be evolved through iterated cycles …
to many complex chemical problems because they can be evolved through iterated cycles …
Programmed assembly of 3-dimensional microtissues with defined cellular connectivity
ZJ Gartner, CR Bertozzi - Proceedings of the National …, 2009 - National Acad Sciences
Multicellular organs comprise differentiated cell types with discrete yet interdependent functions.
The cells' spatial arrangements and interconnectivities, both critical elements of higher-…
The cells' spatial arrangements and interconnectivities, both critical elements of higher-…
[HTML][HTML] Abseq: Ultrahigh-throughput single cell protein profiling with droplet microfluidic barcoding
P Shahi, SC Kim, JR Haliburton, ZJ Gartner… - Scientific reports, 2017 - nature.com
Proteins are the primary effectors of cellular function, including cellular metabolism, structural
dynamics, and information processing. However, quantitative characterization of proteins …
dynamics, and information processing. However, quantitative characterization of proteins …