[PDF][PDF] Comprehensive pan-genomic characterization of adrenocortical carcinoma
…, AC Latronico, BB Mendonca, M Sibony, Z Sanborn… - Cancer cell, 2016 - cell.com
We describe a comprehensive genomic characterization of adrenocortical carcinoma (ACC).
Using this dataset, we expand the catalogue of known ACC driver genes to include …
Using this dataset, we expand the catalogue of known ACC driver genes to include …
Loss-of-function mutations in Notch receptors in cutaneous and lung squamous cell carcinoma
NJ Wang, Z Sanborn, KL Arnett… - Proceedings of the …, 2011 - National Acad Sciences
Squamous cell carcinomas (SCCs) are one of the most frequent forms of human malignancy,
but, other than TP53 mutations, few causative somatic aberrations have been identified. …
but, other than TP53 mutations, few causative somatic aberrations have been identified. …
[HTML][HTML] Modeling precision treatment of breast cancer
Background First-generation molecular profiles for human breast cancers have enabled the
identification of features that can predict therapeutic response; however, little is known about …
identification of features that can predict therapeutic response; however, little is known about …
[PDF][PDF] A distinct DNA methylation shift in a subset of glioma CpG island methylator phenotypes during tumor recurrence
…, A Iavarone, J Snyder, A deCarvalho, Z Sanborn… - Cell reports, 2018 - cell.com
Glioma diagnosis is based on histomorphology and grading; however, such classification
does not have predictive clinical outcome after glioblastomas have developed. To date, no …
does not have predictive clinical outcome after glioblastomas have developed. To date, no …
[HTML][HTML] The somatic genomic landscape of glioblastoma
We describe the landscape of somatic genomic alterations based on multidimensional and
comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify …
comprehensive characterization of more than 500 glioblastoma tumors (GBMs). We identify …
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM
… Zachary Sanborn … where Z is the normalization constant introduced in Equation (1). Similarly,
the probability that x i is in state a along with all of the observations made for the patient is: …
the probability that x i is in state a along with all of the observations made for the patient is: …
[HTML][HTML] Polyoma virus-associated carcinomas of the urologic tract: a clinicopathologic and molecular study
In recent years, there has been increased interest in carcinomas of the urologic tract, that
demonstrate association with the polyoma virus BK arising in immunosuppressed individuals, …
demonstrate association with the polyoma virus BK arising in immunosuppressed individuals, …
Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway
Desmoplastic melanoma is an uncommon variant of melanoma with sarcomatous histology,
distinct clinical behavior and unknown pathogenesis 1 , 2 , 3 . We performed low-coverage …
distinct clinical behavior and unknown pathogenesis 1 , 2 , 3 . We performed low-coverage …
The UCSC cancer genomics browser
To the Editor: Advances in high-throughput genomics have reshaped the cancer research
landscape. Complete characterization of genomic, epigenomic and transcriptomic changes of …
landscape. Complete characterization of genomic, epigenomic and transcriptomic changes of …
Phylogenetic analyses of melanoma reveal complex patterns of metastatic dissemination
Melanoma is difficult to treat once it becomes metastatic. However, the precise ancestral
relationship between primary tumors and their metastases is not well understood. We performed …
relationship between primary tumors and their metastases is not well understood. We performed …