[HTML][HTML] Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges
Emergence of polyphagous herbivorous insects entails significant adaptation to recognize,
detoxify and digest a variety of host-plants. Despite of its biological and practical importance - …
detoxify and digest a variety of host-plants. Despite of its biological and practical importance - …
[PDF][PDF] Community-driven data analysis training for biology
…, D Baker, V Bhardwaj, C Blank, A Bretaudeau… - Cell systems, 2018 - cell.com
The primary problem with the explosion of biomedical datasets is not the data, not computational
resources, and not the required storage space, but the general lack of trained and …
resources, and not the required storage space, but the general lack of trained and …
[HTML][HTML] Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
…, F Legeai, ST Mugford, P Baa-Puyoulet, A Bretaudeau… - Genome biology, 2017 - Springer
Background The prevailing paradigm of host-parasite evolution is that arms races lead to
increasing specialisation via genetic adaptation. Insect herbivores are no exception and the …
increasing specialisation via genetic adaptation. Insect herbivores are no exception and the …
Tools and data services registry: a community effort to document bioinformatics resources
Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to
improvement in human health, agriculture and the environment. In support of these …
improvement in human health, agriculture and the environment. In support of these …
[HTML][HTML] The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest
…, L Bao, M Barberà, M Bouallègue, A Bretaudeau… - BMC biology, 2020 - Springer
Background Although native to North America, the invasion of the aphid-like grape phylloxera
Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the …
Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the …
[HTML][HTML] Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization
…, E Persyn, JM Aury, B Noel, A Bretaudeau… - Communications …, 2021 - nature.com
Endogenous viruses form an important proportion of eukaryote genomes and a source of
novel functions. How large DNA viruses integrated into a genome evolve when they confer a …
novel functions. How large DNA viruses integrated into a genome evolve when they confer a …
Metage2Metabo, microbiota-scale metabolic complementarity for the identification of key species
To capture the functional diversity of microbiota, one must identify metabolic functions and
species of interest within hundreds or thousands of microorganisms. We present …
species of interest within hundreds or thousands of microorganisms. We present …
[HTML][HTML] Adaptation by copy number variation increases insecticide resistance in the fall armyworm
…, CA Blanco, S Hänniger, A Bretaudeau… - Communications …, 2020 - nature.com
Understanding the genetic basis of insecticide resistance is a key topic in agricultural ecology.
The adaptive evolution of multi-copy detoxification genes has been interpreted as a cause …
The adaptive evolution of multi-copy detoxification genes has been interpreted as a cause …
[HTML][HTML] The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes
M Ouedraogo, C Bettembourg, A Bretaudeau, O Sallou… - PloS one, 2012 - journals.plos.org
Background There has been a surge in studies linking genome structure and gene expression,
with special focus on duplicated genes. Although initially duplicated from the same …
with special focus on duplicated genes. Although initially duplicated from the same …
[HTML][HTML] Galaxy Training: A powerful framework for teaching!
…, PD Jagtap, T Wollmann, A Bretaudeau… - PLoS computational …, 2023 - journals.plos.org
There is an ongoing explosion of scientific datasets being generated, brought on by recent
technological advances in many areas of the natural sciences. As a result, the life sciences …
technological advances in many areas of the natural sciences. As a result, the life sciences …