Highly multiplexed subcellular RNA sequencing in situ

…, SSF Jeanty, C Li, R Amamoto, DT Peters, BM Turczyk… - science, 2014 - science.org
Understanding the spatial organization of gene expression with single-nucleotide resolution
requires localizing the sequences of expressed RNA transcripts within a cell in situ. Here, …

Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues

…, R Kalhor, TC Ferrante, R Terry, BM Turczyk… - Nature protocols, 2015 - nature.com
RNA-sequencing (RNA-seq) measures the quantitative change in gene expression over the
whole transcriptome, but it lacks spatial context. In contrast, in situ hybridization provides the …

[PDF][PDF] Excision of group II introns as circles

HL Murray, S Mikheeva, VW Coljee, BM Turczyk… - Molecular cell, 2001 - cell.com
Turczyk,1 excised introns in cellular senescence. Circular double William F. Donahue,1
Avital Bar-Shalom,2 stranded DNA molecules comprised of tandem repeats and Kevin A. …

Precise Cas9 targeting enables genomic mutation prevention

…, RJ Cecchi, J Winston, BM Turczyk… - Proceedings of the …, 2018 - National Acad Sciences
Here, we present a generalized method of guide RNA “tuning” that enables Cas9 to discriminate
between two target sites that differ by a single-nucleotide polymorphism. We employ …

Rapid gene cloning using terminator primers and modular vectors

WF Donahue, BM Turczyk, KA Jarrell - Nucleic acids research, 2002 - academic.oup.com
We seek to create useful biological diversity by exploiting the modular nature of genetic
information. In this report we describe experiments that focus on the modular nature of plasmid …

Deletion of a conserved dinucleotide inhibits the second step of group II intron splicing

S MIKHEEVA, HL MURRAY, HUI ZHOU, BM TURCZYK… - Rna, 2000 - cambridge.org
Few point mutations have been described that specifically inhibit the second step of group II
intron splicing. Furthermore, the effects of such mutations are typically not apparent unless …

[HTML][HTML] Spatial sequencing: a perspective

BM Turczyk, M Busby, AL Martin… - Journal of …, 2020 - ncbi.nlm.nih.gov
Fluorescent spatial sequencing brings next-generation sequencing into a new realm capable
of identifying nucleic acids in the cell’s natural environment. For the first time, scientists are …

[BOOK][B] High-throughput rational protein engineering generates organophosphorus hydrolase variants with improved activity

BM Turczyk - 2005 - search.proquest.com
… In memory of my late father, Michael Jan Turczyk, who provided unlimited support and
direction in my life. May I one day come close to being the thoughtful and understanding man you …

Inclusive semi-leptonic B decays to order 1/mb4

…, T Mannel, S Turczyk - Journal of High Energy …, 2007 - iopscience.iop.org
We give a systematic way to compute higher orders in the 1/mb expansion in inclusive semi-leptonic
decays at tree-level. We reproduce the known 1/mb 3 terms and compute the 1/mb …

Model-independent analysis of lepton flavour violating τ decays

…, T Feldmann, T Mannel, S Turczyk - Journal of High Energy …, 2007 - iopscience.iop.org
Many models for physics beyond the Standard Model predict lepton-flavour violating decays
of charged leptons at a level which may become observable very soon. In the present paper …