User profiles for B. P. Bowen
Ben BowenResearch Scientist, Lawrence Berkeley National Lab Verified email at lbl.gov Cited by 8517 |
Dealing with the unknown: metabolomics and metabolite atlases
BP Bowen, TR Northen - Journal of the American Society for Mass …, 2010 - Springer
Metabolomics is the comprehensive profiling of the small molecule composition of a
biological sample. Since metabolites are often the indirect products of gene expression, this …
biological sample. Since metabolites are often the indirect products of gene expression, this …
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Like all higher organisms, plants have evolved in the context of a microbial world, shaping
both their evolution and their contemporary ecology. Interactions between plant roots and soil …
both their evolution and their contemporary ecology. Interactions between plant roots and soil …
Mass spectrometry—based metabolomics, analysis of metabolite-protein interactions, and imaging
Our understanding of biology has been greatly improved through recent developments in
mass spectrometry, which is providing detailed information on protein and metabolite …
mass spectrometry, which is providing detailed information on protein and metabolite …
Deciphering microbial interactions in synthetic human gut microbiome communities
… bp of the V3–V4 variable region of the 16S rRNA gene. The set of 64 unique forward (6 bp)
and reverse (8 bp) … loaded on the Illumina MiSeq platform for 300 bp paired‐end sequencing. …
and reverse (8 bp) … loaded on the Illumina MiSeq platform for 300 bp paired‐end sequencing. …
Widespread adenine N6-methylation of active genes in fungi
… MACs included in this analysis were a minimum of 100 bp in length, expression was normalized
to the genome with the lowest number of RNA-seq bases mapped and a minimum cutoff …
to the genome with the lowest number of RNA-seq bases mapped and a minimum cutoff …
Proteomics analysis of human skeletal muscle reveals novel abnormalities in obesity and type 2 diabetes
OBJECTIVE Insulin resistance in skeletal muscle is an early phenomenon in the pathogenesis
of type 2 diabetes. Studies of insulin resistance usually are highly focused. However, …
of type 2 diabetes. Studies of insulin resistance usually are highly focused. However, …
Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust
Biological soil crusts (BSCs) cover extensive portions of the earth’s deserts. In order to survive
desiccation cycles and utilize short periods of activity during infrequent precipitation, crust …
desiccation cycles and utilize short periods of activity during infrequent precipitation, crust …
[HTML][HTML] Exometabolite niche partitioning among sympatric soil bacteria
Soils are arguably the most microbially diverse ecosystems. Physicochemical properties have
been associated with the maintenance of this diversity. Yet, the role of microbial substrate …
been associated with the maintenance of this diversity. Yet, the role of microbial substrate …
Untargeted soil metabolomics methods for analysis of extractable organic matter
TL Swenson, S Jenkins, BP Bowen… - Soil Biology and …, 2015 - Elsevier
The cycling of soil organic matter (SOM) by microorganisms is a critical component of the
global carbon cycle but remains poorly understood. There is an emerging view that much of …
global carbon cycle but remains poorly understood. There is an emerging view that much of …
[HTML][HTML] Linking soil biology and chemistry in biological soil crust using isolate exometabolomics
Metagenomic sequencing provides a window into microbial community structure and metabolic
potential; however, linking these data to exogenous metabolites that microorganisms …
potential; however, linking these data to exogenous metabolites that microorganisms …