Structure and function insights into the NuRD chromatin remodeling complex
MP Torchy, A Hamiche, BP Klaholz - Cellular and Molecular Life Sciences, 2015 - Springer
… Among those genes, one could mention CD179b, for progenitor B cells to precursor B cells
differentiation; dntt, required for the V-DJ recombination; or CD4 and CD8a, for thymocytes …
differentiation; dntt, required for the V-DJ recombination; or CD4 and CD8a, for thymocytes …
A structural view of translation initiation in bacteria
…, P Romby, G Yusupova, BP Klaholz… - Cellular and molecular …, 2009 - Springer
… (B) The subsequent adaptation step is described by the crystal structure of the 70S
initiation … The transition from A to B demands unfolding of the mRNA structures involving the …
initiation … The transition from A to B demands unfolding of the mRNA structures involving the …
[HTML][HTML] The crystal structure of the nuclear receptor for vitamin D bound to its natural ligand
… The A/B region is the most divergent among the nuclear receptors and contains an … (a
and b) Comparison of the β sheet region of RARγ (a) and VDR (b) in the same orientation. The …
and b) Comparison of the β sheet region of RARγ (a) and VDR (b) in the same orientation. The …
[HTML][HTML] New tools for the analysis and validation of cryo-EM maps and atomic models
PV Afonine, BP Klaholz, NW Moriarty… - … Section D: Structural …, 2018 - scripts.iucr.org
… all B factors to 0 and calculated two maps at 3.8 and 7.4 Å resolution. We then sampled B
factors in the range 0–500 Å 2 and applied each trial B factor as an overall blurring B factor to …
factors in the range 0–500 Å 2 and applied each trial B factor as an overall blurring B factor to …
Structure of the human 80S ribosome
H Khatter, AG Myasnikov, SK Natchiar, BP Klaholz - Nature, 2015 - nature.com
… 50) was applied to the final maps for appropriate masking, B-factor sharpening and
resolution validation to avoid over-fitting 51 . In this procedure, the appropriate B-factor was …
resolution validation to avoid over-fitting 51 . In this procedure, the appropriate B-factor was …
Structure–function insights into prokaryotic and eukaryotic translation initiation
…, A Simonetti, S Marzi, BP Klaholz - Current opinion in …, 2009 - Elsevier
… (b) Simplified scheme of the initiation of eukaryotic protein synthesis. The 40S subunit
enters the pathway after dissociation from 60S with the help of eIF6, then eIF1A, eIF3, and eIF1 …
enters the pathway after dissociation from 60S with the help of eIF6, then eIF1A, eIF3, and eIF1 …
Visualization of chemical modifications in the human 80S ribosome structure
…, AG Myasnikov, H Kratzat, I Hazemann, BP Klaholz - Nature, 2017 - nature.com
… b, A representative region illustrating the quality of the map and the high-resolution
structural features; see also Extended Data Fig. 3. The map visualizes protein methylations and …
structural features; see also Extended Data Fig. 3. The map visualizes protein methylations and …
N6-Methyladenosine methyltransferase ZCCHC4 mediates ribosomal RNA methylation
… b, Methylation activity of recombinant wild-type ZCCHC4 or catalytically dead mutant on
RNA probes containing distinct sequence motifs (GGACU, GAACU and AAACU, indicated in …
RNA probes containing distinct sequence motifs (GGACU, GAACU and AAACU, indicated in …
Structure of the 30S translation initiation complex
…, A Fabbretti, M Yusupov, CO Gualerzi, BP Klaholz - Nature, 2008 - nature.com
… b, Two pairs of representative class averages and the … b, IF2 positions before and after
joining of the ribosomal subunits 13 … a and b to adopt their positions in 70S initiation complexes. …
joining of the ribosomal subunits 13 … a and b to adopt their positions in 70S initiation complexes. …
Structure of the full human RXR/VDR nuclear receptor heterodimer complex with its DR3 target DNA
Transcription regulation by steroid hormones and other metabolites is mediated by nuclear
receptors (NRs) such as the vitamin D and retinoid X receptors (VDR and RXR). Here, we …
receptors (NRs) such as the vitamin D and retinoid X receptors (VDR and RXR). Here, we …