User profiles for G. M. Hagen

Guy M Hagen

University of Colorado Colorado Springs
Verified email at uccs.edu
Cited by 3319

ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging

…, P Křížek, J Borkovec, Z Švindrych, GM Hagen - …, 2014 - academic.oup.com
ThunderSTORM is an open-source, interactive and modular plug-in for ImageJ designed for
automated processing, analysis and visualization of data acquired by single-molecule …

[BOOK][B] Expected utility hypotheses and the Allais paradox: Contemporary discussions of the decisions under uncertainty with Allais' rejoinder

M Allais, GM Hagen - 2013 - books.google.com
… to be co-editor with Ole Hagen, I should stress that my many … was carried out by Ole Hagen
who assumed its responsibility. It was … To be frank, I would have preferred-as I told Ole Hagen

A benchmark for comparison of cell tracking algorithms

…, HM Blau, O Dzyubachyk, P Křížek, GM Hagen… - …, 2014 - academic.oup.com
Motivation: Automatic tracking of cells in multidimensional time-lapse fluorescence microscopy
is an important task in many biomedical applications. A novel framework for objective …

Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software

…, A Wheeler, A Archetti, B Rieger, R Ober, GM Hagen… - Nature …, 2019 - nature.com
With the widespread uptake of two-dimensional (2D) and three-dimensional (3D) single-molecule
localization microscopy (SMLM), a large set of different data analysis packages have …

SIMToolbox: a MATLAB toolbox for structured illumination fluorescence microscopy

…, T Lukeš, M Ovesný, K Fliegel, GM Hagen - …, 2016 - academic.oup.com
SIMToolbox is an open-source, modular set of functions for MATLAB equipped with a user-friendly
graphical interface and designed for processing two-dimensional and three-…

Three-dimensional super-resolution structured illumination microscopy with maximum a posteriori probability image estimation

…, J Benda, M Ovesný, K Fliegel, M Klíma, GM Hagen - Optics express, 2014 - opg.optica.org
We introduce and demonstrate a new high performance image reconstruction method for
super-resolution structured illumination microscopy based on maximum a posteriori probability …

Flexible structured illumination microscope with a programmable illumination array

P Křížek, I Raška, GM Hagen - Optics express, 2012 - opg.optica.org
Structured illumination microscopy (SIM) has grown into a family of methods which achieve
optical sectioning, resolution beyond the Abbe limit, or a combination of both effects in optical …

Separation of replication and transcription domains in nucleoli

…, Z Švindrych, P Křížek, M Ovesný, GM Hagen… - Journal of structural …, 2014 - Elsevier
In mammalian cells, active ribosomal genes produce the 18S, 5.8S and 28S RNAs of ribosomal
particles. Transcription levels of these genes are very high throughout interphase, and …

[HTML][HTML] Giardia intestinalis mitosomes undergo synchronized fission but not fusion and are constitutively associated with the endoplasmic reticulum

…, P Tůmová, E Einarsson, Z Švindrych, GM Hagen… - BMC biology, 2017 - Springer
Background Mitochondria of opisthokonts undergo permanent fission and fusion throughout
the cell cycle. Here, we investigated the dynamics of the mitosomes, the simplest forms of …

Minimizing detection errors in single molecule localization microscopy

P Křížek, I Raška, GM Hagen - Optics express, 2011 - opg.optica.org
Fluorescence microscopy using single molecule imaging and localization (PALM, STORM,
and similar approaches) has quickly been adopted as a convenient method for obtaining …