… When s = t we have cycles, and C(G) denotes the set of all cycles in G. We denote the number
of edges in a path π by |π| and in a cycle c by |c|. In this paper, we consider the following …

Background In this paper, we address the problem of identifying and quantifying polymorphisms
in RNA-seq data when no reference genome is available, without assembling the full …

Background De Brujin graphs are widely used in bioinformatics for processing next-generation
sequencing data. Due to a very large size of NGS datasets, it is essential to represent de …

… centrifuged at 10,300g for 10 min to pellet crude mitochondria. The supernatant was again
centrifuged at 20,000g for 30 min. Further centrifugation of the supernatant at 100,000g for 90 …

Purpose The clinicopathologic importance of a second estrogen receptor (ER), ER-β, in
breast cancers has been intensely studied; however, there is still no real consensus regarding …

… "P-labeled probes (specific activity >1 x 10"cpm/^g DNA) labeled … All DNAs from each
sample (5 ^g) were digested with … of chro mosome 16q+g …

De Brujin graphs are widely used in bioinformatics for processing next-generation sequencing
(NGS) data. Due to the very large size of NGS datasets, it is essential to represent de …

OMNI UV Page 1 BRIEF DESCRIPTION AND SELECTION CRITERIA FOR CONTENT OF THE
TABLES Tables 1-4 present a summary of published data on the Ultraviolet (UV) dose-response …

… Each path is then mapped on the reference genome using STAR and the event is annotated
by KisSplice2RefGenome, using the EnsEMBL r75 annotations as an evidence. Importantly, …

… For every arc of \(\mathcal {T}\), we give the weight of the corresponding arc in G. Now,
Algorithm 4 using a priority queue with \(w(\pi _{su}) + d_G(u,t)\) as keys performs a Dijkstra-like …