User profiles for L. P. Kozlowski
Lukasz P. KozlowskiUniversity of Warsaw, Solid Scientometrics Sp z oo Verified email at mimuw.edu.pl Cited by 1836 |
[HTML][HTML] MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins
LP Kozlowski, JM Bujnicki - BMC bioinformatics, 2012 - Springer
Background Intrinsically unstructured proteins (IUPs) lack a well-defined three-dimensional
structure. Some of them may assume a locally stable structure under specific conditions, eg …
structure. Some of them may assume a locally stable structure under specific conditions, eg …
[HTML][HTML] IPC–isoelectric point calculator
LP Kozlowski - Biology direct, 2016 - Springer
Background Accurate estimation of the isoelectric point (pI) based on the amino acid
sequence is useful for many analytical biochemistry and proteomics techniques such as 2-D …
sequence is useful for many analytical biochemistry and proteomics techniques such as 2-D …
Proteome-pI: proteome isoelectric point database
LP Kozlowski - Nucleic acids research, 2017 - academic.oup.com
Proteome-pI is an online database containing information about predicted isoelectric points
for 5029 proteomes calculated using 18 methods. The isoelectric point, the pH at which a …
for 5029 proteomes calculated using 18 methods. The isoelectric point, the pH at which a …
IPC 2.0: prediction of isoelectric point and pKa dissociation constants
LP Kozlowski - Nucleic Acids Research, 2021 - academic.oup.com
The isoelectric point is the pH at which a particular molecule is electrically neutral due to the
equilibrium of positive and negative charges. In proteins and peptides, this depends on the …
equilibrium of positive and negative charges. In proteins and peptides, this depends on the …
CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction
T Puton, LP Kozlowski, KM Rother… - Nucleic acids …, 2013 - academic.oup.com
We present a continuous benchmarking approach for the assessment of RNA secondary
structure prediction methods implemented in the CompaRNA web server. As of 3 October 2012, …
structure prediction methods implemented in the CompaRNA web server. As of 3 October 2012, …
Proteome-pI 2.0: proteome isoelectric point database update
LP Kozlowski - Nucleic acids research, 2022 - academic.oup.com
Proteome-pI 2.0 is an update of an online database containing predicted isoelectric points
and pK a dissociation constants of proteins and peptides. The isoelectric point—the pH at …
and pK a dissociation constants of proteins and peptides. The isoelectric point—the pH at …
Going to extremes–a metagenomic journey into the dark matter of life
…, J Kalinowski, LP Kozlowski… - FEMS microbiology …, 2021 - academic.oup.com
The Virus-X—Viral Metagenomics for Innovation Value—project was a scientific expedition
to explore and exploit uncharted territory of genetic diversity in extreme natural environments …
to explore and exploit uncharted territory of genetic diversity in extreme natural environments …
[HTML][HTML] Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage …
Phage vB_Tsc2631 infects the extremophilic bacterium Thermus scotoductus MAT2631 and
uses the Ts2631 endolysin for the release of its progeny. The Ts2631 endolysin is the first …
uses the Ts2631 endolysin for the release of its progeny. The Ts2631 endolysin is the first …
Computational modeling of protein–RNA complex structures
Protein–RNA interactions play fundamental roles in many biological processes, such as
regulation of gene expression, RNA splicing, and protein synthesis. The understanding of these …
regulation of gene expression, RNA splicing, and protein synthesis. The understanding of these …
GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function
Motivation: To date, only a few distinct successful approaches have been introduced to
reconstruct a protein 3D structure from a map of contacts between its amino acid residues (a 2D …
reconstruct a protein 3D structure from a map of contacts between its amino acid residues (a 2D …