User profiles for M. V. Pogorelyy

Mikhail Pogorelyy

St. Jude Children's Research Hospital
Verified email at stjude.org
Cited by 2754

[HTML][HTML] VDJtools: unifying post-analysis of T cell receptor repertoires

…, EV Putintseva, MV Pogorelyy… - PLoS computational …, 2015 - journals.plos.org
Despite the growing number of immune repertoire sequencing studies, the field still lacks
software for analysis and comprehension of this high-dimensional data. Here we report …

[PDF][PDF] SARS-CoV-2 mRNA vaccination elicits a robust and persistent T follicular helper cell response in humans

PA Mudd, AA Minervina, MV Pogorelyy, JS Turner… - Cell, 2022 - cell.com
SARS-CoV-2 mRNA vaccines induce robust anti-spike (S) antibody and CD4 + T cell
responses. It is not yet clear whether vaccine-induced follicular helper CD4 + T (T FH ) cell …

[HTML][HTML] SARS-CoV-2 antigen exposure history shapes phenotypes and specificity of memory CD8+ T cells

AA Minervina, MV Pogorelyy, AM Kirk, JC Crawford… - Nature …, 2022 - nature.com
Although mRNA vaccine efficacy against severe coronavirus disease 2019 remains high,
variant emergence has prompted booster immunizations. However, the effects of repeated …

[HTML][HTML] VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2

…, D Bolotin, PG Thomas, AA Minervina, MV Pogorelyy… - Nature …, 2022 - nature.com
In 2016, we started a community effort to gather and curate publicly available sequence
data acquired from T cell receptor (TCRs) with defined antigen specificities, as well as …

[HTML][HTML] tcR: an R package for T cell receptor repertoire advanced data analysis

VI Nazarov, MV Pogorelyy, EA Komech, IV Zvyagin… - BMC …, 2015 - Springer
Background The Immunoglobulins (IG) and the T cell receptors (TR) play the key role in
antigen recognition during the adaptive immune response. Recent progress in next-generation …

Longitudinal high-throughput TCR repertoire profiling reveals the dynamics of T-cell memory formation after mild COVID-19 infection

…, T Mora, AM Walczak, YB Lebedev, MV Pogorelyy - Elife, 2021 - elifesciences.org
COVID-19 is a global pandemic caused by the SARS-CoV-2 coronavirus. T cells play a key
role in the adaptive antiviral immune response by killing infected cells and facilitating the …

Dynamics of individual T cell repertoires: from cord blood to centenarians

…, IZ Mamedov, MV Pogorelyy… - The Journal of …, 2016 - journals.aai.org
The diversity, architecture, and dynamics of the TCR repertoire largely determine our ability
to effectively withstand infections and malignancies with minimal mistargeting of immune …

[HTML][HTML] Robust and prototypical immune responses toward COVID-19 vaccine in First Nations peoples are impacted by comorbidities

…, P Chaurasia, F Mordant, MV Pogorelyy… - Nature …, 2023 - nature.com
High-risk groups, including Indigenous people, are at risk of severe COVID-19. Here we
found that Australian First Nations peoples elicit effective immune responses to COVID-19 …

Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing

IV Zvyagin, MV Pogorelyy… - Proceedings of the …, 2014 - National Acad Sciences
Adaptive immunity in humans is provided by hypervariable Ig-like molecules on the surface
of B and T cells. The final set of these molecules in each organism is formed under the …

[HTML][HTML] Detecting T cell receptors involved in immune responses from single repertoire snapshots

MV Pogorelyy, AA Minervina, M Shugay… - PLoS …, 2019 - journals.plos.org
… Right panel shows the number of clonotypes identified by the algorithm that have high
similarity to clonotypes significantly expanded after YF immunization from Pogorelyy and …