Bioaccumulation of therapeutic drugs by human gut bacteria
Bacteria in the gut can modulate the availability and efficacy of therapeutic drugs. However,
the systematic mapping of the interactions between drugs and bacteria has only started …
the systematic mapping of the interactions between drugs and bacteria has only started …
[HTML][HTML] Perturbation-response genes reveal signaling footprints in cancer gene expression
M Schubert, B Klinger, M Klünemann, A Sieber… - Nature …, 2018 - nature.com
Aberrant cell signaling can cause cancer and other diseases and is a focal point of drug
research. A common approach is to infer signaling activity of pathways from gene expression. …
research. A common approach is to infer signaling activity of pathways from gene expression. …
Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies
…, M Pruteanu, M Klünemann, M Kuhn, M Galardini… - Nature …, 2018 - nature.com
Bacterial metabolism plays a fundamental role in gut microbiota ecology and host–microbiome
interactions. Yet the metabolic capabilities of most gut bacteria have remained unknown. …
interactions. Yet the metabolic capabilities of most gut bacteria have remained unknown. …
SPEED2: inferring upstream pathway activity from differential gene expression
M Rydenfelt, B Klinger, M Klünemann… - Nucleic acids …, 2020 - academic.oup.com
Extracting signalling pathway activities from transcriptome data is important to infer mechanistic
origins of transcriptomic dysregulation, for example in disease. A popular method to do …
origins of transcriptomic dysregulation, for example in disease. A popular method to do …
Computational tools for modeling xenometabolism of the human gut microbiota
M Klünemann, M Schmid, KR Patil - Trends in biotechnology, 2014 - cell.com
The gut microbiota is increasingly being recognized as a key site of metabolism for drugs and
other xenobiotic compounds that are relevant to human health. The molecular complexity …
other xenobiotic compounds that are relevant to human health. The molecular complexity …
[HTML][HTML] Methionine Sources Differently Affect Production of Reactive Oxygen Species, Mitochondrial Bioenergetics, and Growth of Murine and Quail Myoblasts In Vitro
…, R Whelan, M Klünemann, M Röntgen - Current Issues in …, 2023 - mdpi.com
An optimal supply of L-methionine (L-Met) improves muscle growth, whereas over-supplementation
exerts adverse effects. To understand the underlying mechanisms, this study aims at …
exerts adverse effects. To understand the underlying mechanisms, this study aims at …
[HTML][HTML] Are the main methionine sources equivalent? A focus on DL-methionine and DL-methionine hydroxy analog reveals differences on rainbow trout hepatic cell …
…, K Masagounder, M Klünemann… - International Journal of …, 2022 - mdpi.com
The replacement of fishmeal by plant proteins in aquafeeds imposes the use of synthetic
methionine (MET) sources to balance the amino acid composition of alternative diets and so to …
methionine (MET) sources to balance the amino acid composition of alternative diets and so to …
[HTML][HTML] Multi-tissue transcriptomics demonstrates the systemic physiology of methionine deficiency in broiler chickens
M Klünemann, LF Romero, M Acman, MC Milfort… - animal, 2024 - Elsevier
Methionine (Met) supplementation is common practice in broilers to support nutrition, yet
there are gaps in the understanding of its role in systemic physiology. Furthermore, several …
there are gaps in the understanding of its role in systemic physiology. Furthermore, several …
[HTML][HTML] Dietary methionine source alters the lipidome in the small intestinal epithelium of pigs
II Schermuly, S Romanet, M Klünemann… - Scientific Reports, 2022 - nature.com
Methionine (Met) as an essential amino acid has key importance in a variety of metabolic
pathways. This study investigated the influence of three dietary Met supplements (0.21% L-Met, …
pathways. This study investigated the influence of three dietary Met supplements (0.21% L-Met, …
[HTML][HTML] Effects of supplementation of Bacillus amyloliquefaciens on performance, systemic immunity, and intestinal microbiota of weaned pigs experimentally infected with a …
C Jinno, B Wong, M Klünemann, J Htoo, X Li… - Frontiers in …, 2023 - frontiersin.org
The objective of this study was to investigate the effects of dietary supplementation of Bacillus
(B.) amyloliquefaciens on growth performance, diarrhea, systemic immunity, and intestinal …
(B.) amyloliquefaciens on growth performance, diarrhea, systemic immunity, and intestinal …