… The median sequencing coverage at non-N reference sequence was >40×. … ) 21 (version
0.6.2) with the parameters -n 0.06 and -q 5. PCR duplicates were removed using SAMtools (…

… , which has the putative ancestral karyotype of n=31. Using a phylogenetic analyses of … ,
we conclude that the ancestral lepidopteran karyotype has been n=31 for at least 140 My. We …

… For any string S½1;nŠ, we write jSj ¼ n to denote its length. A substring of S is written as
S½i; jŠ ¼ S½iŠÁÁÁS½jŠ. Important types of substrings include prefixes S½1; jŠ and suffixes …

… The frequency support vector has N entries, each being the number of … N 2 M) where N
is number of samples and M is number of k-mers, but can be parallelized across up to N …

… The solution is not as space-efficient as possible, since array SA requires n log n bits,
and the solution is not yet a self-index, since T is needed in order to solve the display query. …

… Chromosomal stability of the MSS IBD-CRCs was inspected using both nanopore WGS
data (n = 19) and single nucleotide polymorphism array data (n = 27). Numbers of somatic …

The use of whole-genome phylogenetic analysis has revolutionized our understanding of
the evolution and spread of many important bacterial pathogens due to the high resolution …

Streptococcus suis causes disease in pigs worldwide and is increasingly implicated in
zoonotic disease in East and South-East Asia. To understand the genetic basis of disease in S. …

The environmental bacterium Burkholderia pseudomallei causes an estimated 165,000 cases
of human melioidosis per year worldwide and is also classified as a biothreat agent. We …

Cellular perturbations underlying Alzheimer's disease (AD) are primarily studied in human
postmortem samples and model organisms. Here, we generated a single-nucleus atlas from a …