Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities
With the development of new experimental technologies, biologists are faced with an avalanche
of data to be computationally analyzed for scientific advancements and discoveries to …
of data to be computationally analyzed for scientific advancements and discoveries to …
Migration of dendritic cells: physical principles, molecular mechanisms, and functional implications
…, M Chabaud, M Le Berre, YJ Liu, O Collin… - Immunological …, 2013 - Wiley Online Library
Dendritic cells ( DC s) constitute a complex cell population that resides in both peripheral
tissues and lymphoid organs. Their major function in tissues is to patrol their environment in …
tissues and lymphoid organs. Their major function in tissues is to patrol their environment in …
The BioMart community portal: an innovative alternative to large, centralized data repositories
The BioMart Community Portal ( www.biomart.org ) is a community-driven effort to provide a
unified interface to biomedical databases that are distributed worldwide. The portal provides …
unified interface to biomedical databases that are distributed worldwide. The portal provides …
Rapid signal transduction in living cells is a unique feature of mechanotransduction
S Na, O Collin, F Chowdhury, B Tay… - Proceedings of the …, 2008 - National Acad Sciences
It is widely postulated that mechanotransduction is initiated at the local force–membrane
interface by inducing local conformational changes of proteins, similar to soluble ligand-…
interface by inducing local conformational changes of proteins, similar to soluble ligand-…
FISH-quant: automatic counting of transcripts in 3D FISH images
…, A Senecal, K Tantale, H Marie-Nelly, N Ly, O Collin… - Nature …, 2013 - nature.com
To the Editor: Transcription is inherently stochastic even in clonal cell populations1. Studies
at the single-cell, single-molecule level enable a quantitative understanding of the …
at the single-cell, single-molecule level enable a quantitative understanding of the …
Contractility of the cell rear drives invasion of breast tumor cells in 3D Matrigel
R Poincloux, O Collin, F Lizárraga… - Proceedings of the …, 2011 - National Acad Sciences
Cancer cells use different modes of migration, including integrin-dependent mesenchymal
migration of elongated cells along elements of the 3D matrix as opposed to low-adhesion-, …
migration of elongated cells along elements of the 3D matrix as opposed to low-adhesion-, …
[HTML][HTML] Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
… persicae clone O populations are found on multiple crop species in the UK and France, …
persicae clones, G006 from the USA and O from the UK and the transcriptomes of clone O …
persicae clones, G006 from the USA and O from the UK and the transcriptomes of clone O …
Leydig cells secrete factors which increase vascular permeability and endothelial cell proliferation
Adult intact control rats, and animals treated with human chorionic gonadotrophin (hCG) or
with ethane dimethane sulphonate (EDS) to deplete Leydig cells, were injected with …
with ethane dimethane sulphonate (EDS) to deplete Leydig cells, were injected with …
[PDF][PDF] Self-organized podosomes are dynamic mechanosensors
O Collin, S Na, F Chowdhury, M Hong, ME Shin… - Current biology, 2008 - cell.com
Podosomes are self-organized, dynamic, actin-containing structures that adhere to the
extracellular matrix via integrins [1–5]. Yet, it is not clear what regulates podosome dynamics and …
extracellular matrix via integrins [1–5]. Yet, it is not clear what regulates podosome dynamics and …
AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome
AphidBase is a centralized bioinformatic resource that was developed to facilitate community
annotation of the pea aphid genome by the International Aphid Genomics Consortium (…
annotation of the pea aphid genome by the International Aphid Genomics Consortium (…