[HTML][HTML] The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized …
PD Stenson, M Mort, EV Ball, K Shaw, AD Phillips… - Human genetics, 2014 - Springer
The Human Gene Mutation Database (HGMD ® ) is a comprehensive collection of germline
mutations in nuclear genes that underlie, or are associated with, human inherited disease. …
mutations in nuclear genes that underlie, or are associated with, human inherited disease. …
[HTML][HTML] The Human Gene Mutation Database: towards a comprehensive repository of inherited mutation data for medical research, genetic diagnosis and next …
PD Stenson, M Mort, EV Ball, K Evans, M Hayden… - Human genetics, 2017 - Springer
The Human Gene Mutation Database (HGMD ® ) constitutes a comprehensive collection of
published germline mutations in nuclear genes that underlie, or are closely associated with …
published germline mutations in nuclear genes that underlie, or are closely associated with …
[HTML][HTML] The Human Gene Mutation Database (HGMD®): optimizing its use in a clinical diagnostic or research setting
PD Stenson, M Mort, EV Ball, M Chapman, K Evans… - Human genetics, 2020 - Springer
… Notable examples of clinically significant DFPs present in HGMD include the DPYD allele
p.Cys29Arg (global MAF 0.28) which may be relevant for 5-fluorouracil toxicity and F5 p.…
p.Cys29Arg (global MAF 0.28) which may be relevant for 5-fluorouracil toxicity and F5 p.…
[HTML][HTML] Analysis of protein-coding genetic variation in 60,706 humans
…, SA Rose, DM Ruderfer, K Shakir, PD Stenson… - Nature, 2016 - nature.com
Large-scale reference data sets of human genetic variation are critical for the medical and
functional interpretation of DNA sequence changes. Here we describe the aggregation and …
functional interpretation of DNA sequence changes. Here we describe the aggregation and …
Human Gene Mutation Database (HGMD®): 2003 update
PD Stenson, EV Ball, M Mort, AD Phillips… - Human …, 2003 - Wiley Online Library
The Human Gene Mutation Database (HGMD) constitutes a comprehensive core collection
of data on germ‐line mutations in nuclear genes underlying or associated with human …
of data on germ‐line mutations in nuclear genes underlying or associated with human …
Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models
… where P w and P m represent the underlying probabilities for the wild-type and mutant
amino acid residues, respectively, and the pathogenicity weights, W d and W n , represent the …
amino acid residues, respectively, and the pathogenicity weights, W d and W n , represent the …
[HTML][HTML] The human gene mutation database: 2008 update
PD Stenson, M Mort, EV Ball, K Howells, AD Phillips… - Genome medicine, 2009 - Springer
… Peter D Stenson … Peter D Stenson, Matthew Mort, Edward V Ball, Katy Howells,
Andrew D Phillips, Nick ST Thomas & David N Cooper … Peter D Stenson …
Andrew D Phillips, Nick ST Thomas & David N Cooper … Peter D Stenson …
[HTML][HTML] Insights into hominid evolution from the gorilla genome sequence
…, D Schmidt, K Shaw, JT Simpson, PD Stenson… - Nature, 2012 - nature.com
Gorillas are humans’ closest living relatives after chimpanzees, and are of comparable
importance for the study of human origins and evolution. Here we present the assembly and …
importance for the study of human origins and evolution. Here we present the assembly and …
M-CAP eliminates a majority of variants of uncertain significance in clinical exomes at high sensitivity
… We define p nk as the proportion of class k observations (y i ) in node n. The Gini index for
a specific node is the sum of the variance in proportion for all classes (K). The Gini importance …
a specific node is the sum of the variance in proportion for all classes (K). The Gini importance …
[HTML][HTML] Identifying Mendelian disease genes with the variant effect scoring tool
… to assign p-values to predictions. In order to identify the causal genes, we aggregated VEST
p-… The results of the simulations support the potential of our p-value-based gene score to …
p-… The results of the simulations support the potential of our p-value-based gene score to …