User profiles for R. B. Deal

Roger B. Deal

Associate Professor, Department of Biology, Emory University
Verified email at emory.edu
Cited by 4816

Histone variants and modifications in plant gene regulation

RB Deal, S Henikoff - Current opinion in plant biology, 2011 - Elsevier
… In recent years a great deal of progress has been made in identifying many of the genes that
are responsive to these varied environmental conditions, and also in understanding the role …

Histone variants in the specialization of plant chromatin

M Foroozani, DH Holder, RB Deal - Annual review of plant …, 2022 - annualreviews.org
… We thank members of the Deal lab for constructive comments and discussion on the
manuscript. MF, DHH, and RBD were supported by National Institutes of Health (NIH) grant …

Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones

RB Deal, JG Henikoff, S Henikoff - Science, 2010 - science.org
… By measuring the incorporation of newly produced histones, RB Deal et al. showed that
nucleosomes are replaced on a fast time scale across the Drosophila genome ("Genome-wide …

Repression of Flowering in Arabidopsis Requires Activation of FLOWERING LOCUS C Expression by the Histone Variant H2A.Z

RB Deal, CN Topp, EC McKinney, RB Meagher - The Plant Cell, 2007 - academic.oup.com
… Preliminary microarray experiments comparing wild-type and arp6-1 plants (RB Deal and
RB Meagher, unpublished data) revealed a large number of genes whose expression was …

Combining unbiased estimators

FA Graybill, RB Deal - Biometrics, 1959 - JSTOR
1. Introduction. In applied statistics the problem of combining two unbiased estimators often
arises. If the estimators have unequal variances, than the problem of how to weight the …

[PDF][PDF] A simple method for gene expression and chromatin profiling of individual cell types within a tissue

RB Deal, S Henikoff - Developmental cell, 2010 - cell.com
Understanding the production and function of specialized cells during development requires
the isolation of individual cell types for analysis, but this is currently a major technical …

The INTACT method for cell type–specific gene expression and chromatin profiling in Arabidopsis thaliana

RB Deal, S Henikoff - Nature protocols, 2011 - nature.com
Genomic studies of cell differentiation and function within a whole organism depend on the
ability to isolate specific cell types from a tissue, but this is technically difficult. We developed …

Hairy Root Transformation Using Agrobacterium rhizogenes as a Tool for Exploring Cell Type-Specific Gene Expression and Function Using Tomato as a Model

…, S Inagaki, F Federici, N Sinha, RB Deal… - Plant …, 2014 - academic.oup.com
Agrobacterium rhizogenes (or Rhizobium rhizogenes) is able to transform plant genomes
and induce the production of hairy roots. We describe the use of A. rhizogenes in tomato (…

On the origin and evolutionary consequences of gene body DNA methylation

…, B Hartwig, C Kiefer, RB Deal… - Proceedings of the …, 2016 - National Acad Sciences
In plants, CG DNA methylation is prevalent in the transcribed regions of many constitutively
expressed genes (gene body methylation; gbM), but the origin and function of gbM remain …

Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules

…, J Bailey-Serres, N Sinha, SM Brady, RB Deal - The Plant …, 2018 - academic.oup.com
The transcriptional regulatory structure of plant genomes remains poorly defined relative to
animals. It is unclear how many cis-regulatory elements exist, where these elements lie …